Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0830 |
Symbol | |
ID | 6478015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 962815 |
End bp | 963723 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642729980 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002027218 |
Protein GI | 194364608 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.588944 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATCACT TCGCCGCCCT GCGTGCGCTG CGCGCCATCG TCGACGCGGG CAGTTTCACT GCTGCCGCTG AACGCCTGGG AACCACCCAT TCGGCGATGT CGCGGCAACT GCGGCAGTTG GAAGAGCACC TGCAGGTTCG ACTGCTCGAT CGCAACAGTC GCCGGCTGTC ACTGACCGAG GCCGGTCGCG ATTACTACCG CGAGGCGGCA GCGCTGCTGG ATCGCCTGCA GGAAGCCGAC GATCGTGCGC GTGCCGGGCA GGCACAGCCC AGCGGCACGG TACGCATCAG CGTGCCGCAG GTCGTGGCCA GCCAGGAGTT GCCGCATTGG CTGCCGTCGT TCCTGCAGCG CTACCCGCAG GTGACGCTGG ATCTTTCTGC CGACGACCAG CTGGTCGATG TGGTGGGCGG TGGTTTCGAC CTGGCGCTGC GCATCGCGGC TTCGTTGCCG GACAGCCAGC TGGTCGCGCG CGAACTGGCC AGCTGCCCGC GCATCCTGGT CGCTGCACCG GCCTATCTGG CGCGGCACGG TCTACCCCGC CAGGCTTCGG ATCTCGCGCA GCACACGCTG CTCGGCTTCA GCCCCACGCC GTCAATGCTG CCCTGGCAGC TGCAGGGGCC GCGCGGTGCC ACCGCGAGCA TCGAAGCGGG CCAACGGCTG CGCGTGGACG CTACGCCCGC GTTGTACGCC GCCGCGTTGG CCGGCATGGG CATCAGCCTG TTCACTGCGC TCACCGTGCA GGAAGACCTG CGCGCCGGTC GATTGATCCG CGTGCTGCCC GCCTGGCATG CCGGGCAGCG ACACTACTTC GCGCTGTACC CGCATGCCAG GGCACTCGCC CCCAAGGTGC GTGCGCTGGT CGAGCACCTC GCCGCGCACT ACGCTGCACA GGTTGGCGCG GCAGGCTAG
|
Protein sequence | MDHFAALRAL RAIVDAGSFT AAAERLGTTH SAMSRQLRQL EEHLQVRLLD RNSRRLSLTE AGRDYYREAA ALLDRLQEAD DRARAGQAQP SGTVRISVPQ VVASQELPHW LPSFLQRYPQ VTLDLSADDQ LVDVVGGGFD LALRIAASLP DSQLVARELA SCPRILVAAP AYLARHGLPR QASDLAQHTL LGFSPTPSML PWQLQGPRGA TASIEAGQRL RVDATPALYA AALAGMGISL FTALTVQEDL RAGRLIRVLP AWHAGQRHYF ALYPHARALA PKVRALVEHL AAHYAAQVGA AG
|
| |