Gene Smal_0825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0825 
Symbol 
ID6478010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp957907 
End bp959607 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content69% 
IMG OID642729975 
Productpeptidase M48 Ste24p 
Protein accessionYP_002027213 
Protein GI194364603 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGCCC CCCGCCCTGC CACGCTTGGC ACGCCCTGCC CGAGGACCCT CTGCTTGCGA 
GCCCTGCTGC TGACTACCGC CGTCACCCTG GCCCTGGCCA TGCCGTTGGC CCAGGCCCAG
GAGAAGCTGC CCGACATCGG CTCCTCGGCC GGCGAGCTGC TGACCCCGGC CCGCCAGGCC
GAGTACGGCG CGATGATGCT GCGCGAGCTG CGCAACTACG GCTACCTGCT GGATGACCCG
CTGGTCAACG ACTGGCTGCA GACCATGGGT ACCCGGCTCG GCTCCAACAG TGACCAGCCA
CGCCAGCCCT ACACCTTCTT CGTGATGAAG GACCGGCAGA TCAATGCCTT CGCCACCTTG
GGCGGCTACA TCGGGGTCAA TGCCGGCCTG GTGCTGACCG CCGAACGCGA GGACGAAGTG
GCCGCCGTGC TGTCGCACGA AATCGCCCAC GTCACCCAGC AGCACGTGCT GCGCGGGGTC
GAGCGCGCCC AGCGCGACCA GATTCCGATC CTGCTCGGCA TGCTGGCAGC CGTGGTGGCC
GCCCAGGCCA GCAACAGCAC CTCCTCGGGC AACGCAACCA TGGCCGCGAT CAGCTCGGGC
ATGGGCCTGA TGCAGCAACG CCAGATCAAC TACACCCGCT CCAACGAGTC CGAGGCCGAC
CGCCTCGGCA TCCGCACGCT GGCGCGCAGC GGCTACGACG TGGATGCGAT GGCCGGCTTC
TTCGAGCGGA TGTCGGCGGC GATGCGCGGC AACGAGGGCG GCTACAGCGT CCCCGAGTTC
CTGCGCACGC ACCCGGTCAA CATCACCCGC ATCAGCGAAG CCAAGGCCCG CGCCGACCAG
ATGAAGAAGG ACACGGTGCT ACTGACCACC AGCACCCCCA GCGGTGAGCG CAAGGAACGG
GTGGACCCGG CAGACCCCAG CCTGGCCGAA CCGCTGCTGC GTGGAAACAA CCCGTTGCTG
CCCAGCAGCG TGCTGCGTAT TCCGATGGGC CAGCTCAGCC GTGGCGCCAG CGGCGACTTC
GATTGGGCAC GCGAGCGCCT GCGCGTGCTC AGCGCGGATT CCACCGCCGA GCTGGAGCGC
GAGTATGCGG ACATGGCCAA GCGCCAGAAG GACGGTCTCA ACGACGCCCA GCGCTATGGC
CAGGCCCTGG CCATGATGCG GAGCGGTCGC AACGGCGCCA CGCAGGCCCG GCAGACGCTG
GCGGGCCTGC TGCAGACCCG CCGGGACAAC CTGTGGCTGG CACTGGCCCT GGGGGAGGCC
GAACTGCGTG CCGGGCAGGC CGCCCAGGCC AACAGCCGCT TCGAGCAGCT GCTGCGTGAG
CACCCCAGCA GCCGCCCGGT GGCGCTGACG TATGCCGAAA TCCTGAACGA ACAGGGCAAC
CGCGAGGCCG GCCAGCGCGC GCAGGCCATG CTGCGCCCCC TGCTGTCGCA AAGTGGTAAC
GATCCGGTCT TCCAGCAGCG TTATGCCCGC GCCAGCGAAC TGGCTGGTGA CAGCGTGCGG
GCCAGCGAGG CCTATGCCGA GGCGGCGTTC CTCAGCGGCC GCCCGGAACA GTCGCTGATG
CAGCTGCAGG CGCTCAAGCG CAATCCGGCG CTGGACTATG TGGGCCGGGC CCGGGTGGAC
GCTCGCATCG AGGCGATCAC CCCCACCGTG CTGGAACTAC GCCGGCAGGG CGTGCAGGAC
CCGGACCTGG ACCGCCGCTG A
 
Protein sequence
MVAPRPATLG TPCPRTLCLR ALLLTTAVTL ALAMPLAQAQ EKLPDIGSSA GELLTPARQA 
EYGAMMLREL RNYGYLLDDP LVNDWLQTMG TRLGSNSDQP RQPYTFFVMK DRQINAFATL
GGYIGVNAGL VLTAEREDEV AAVLSHEIAH VTQQHVLRGV ERAQRDQIPI LLGMLAAVVA
AQASNSTSSG NATMAAISSG MGLMQQRQIN YTRSNESEAD RLGIRTLARS GYDVDAMAGF
FERMSAAMRG NEGGYSVPEF LRTHPVNITR ISEAKARADQ MKKDTVLLTT STPSGERKER
VDPADPSLAE PLLRGNNPLL PSSVLRIPMG QLSRGASGDF DWARERLRVL SADSTAELER
EYADMAKRQK DGLNDAQRYG QALAMMRSGR NGATQARQTL AGLLQTRRDN LWLALALGEA
ELRAGQAAQA NSRFEQLLRE HPSSRPVALT YAEILNEQGN REAGQRAQAM LRPLLSQSGN
DPVFQQRYAR ASELAGDSVR ASEAYAEAAF LSGRPEQSLM QLQALKRNPA LDYVGRARVD
ARIEAITPTV LELRRQGVQD PDLDRR