Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0798 |
Symbol | |
ID | 6477983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 921775 |
End bp | 922416 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 642729948 |
Product | protein of unknown function DUF161 |
Protein accession | YP_002027186 |
Protein GI | 194364576 |
COG category | [S] Function unknown |
COG ID | [COG2364] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.12912 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.297563 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACCG CCCTGCCCCT GCGCCTGCTG CAACTGATCG TCGGCCTGTT CCTCTATGGC TTCGGTGCCT CGCTGATGAT CCGTGCCGCC ATCGGCGTGG CGCCGTGGGA TGTGCTGTCG CAGGGCATCG CCGCGCAGAC GCCGCTGTCC TTCGGCCTGG CCACCAACGT GATCGGCGCA CTGGTGCTGC TGCTGTGGTG GCCATTGCGA CAGAAGCCAG GCGCGGGAAC CGTGCTCAAC GTGATGCTGA TCGGCCCGTC CGCGCAGTTC GGCCTGTGGC TGCTGCCGCC AGCAGTCGGC CTCGGCTGGC AGCTGGCGAT GTTCTGCGCC GGCATGCTGC TGGTCGCGCT GGCCACCGGC CTGTACATCG GCGCCAGGCT CGGCCCGGGC CCGCGCGATG GCCTGATGAC CGGACTGCAC GCCCGTACGG GCTGGCCGAT CTGGAAGGTG CGCAGCCTGA TCGAAGGCAG CGTGCTGCTG CTGGGCTGGT GGCTGGGCGG TGATGTCGGC CTGGGCACGC TGGCCTTCGC CCTGCTGATC GGCCCGCTGT GCGGCGTGAC GCTGGGCTGG TTCGGGATTG GTCGTCCCGC GGTGGGTAGC GCCCGGCCAC GCCCGGCGAG CGCGCAGCGC GGCCAGGGGT AG
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Protein sequence | MPTALPLRLL QLIVGLFLYG FGASLMIRAA IGVAPWDVLS QGIAAQTPLS FGLATNVIGA LVLLLWWPLR QKPGAGTVLN VMLIGPSAQF GLWLLPPAVG LGWQLAMFCA GMLLVALATG LYIGARLGPG PRDGLMTGLH ARTGWPIWKV RSLIEGSVLL LGWWLGGDVG LGTLAFALLI GPLCGVTLGW FGIGRPAVGS ARPRPASAQR GQG
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