Gene Smal_0789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0789 
Symbol 
ID6477892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp911419 
End bp911910 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content63% 
IMG OID642729939 
ProductPeptidylprolyl isomerase 
Protein accessionYP_002027177 
Protein GI194364567 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.191731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0671641 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTCA TCGCCACTTT CGACACCACC CAGGGCCCGA TCAAGGTCGA GCTGTTCGCT 
GACAAGGCGC CGCTGACCGT GGCCAACTTC GTGAACCTGG TCAAGCACGG CTTCTATGAC
GGCCTGATCT TCCACCGCGT GATCGCCGAC TTCATGATCC AGGGCGGCTG CCCCAAGGGT
CAGGGCACCG GTGGCCCGGG CTACAAGTTC GAAGACGAGA AGAATGGTGT GAAGCACCAG
GTCGGCTCGC TGTCGATGGC CAATGCCGGT CCGAACACCA ACGGCAGCCA GTTCTTCATC
ACCCACATCA AGACCGATTG GCTGGATGGC AAGCACACCG TGTTCGGCCA GGTGCTGGAC
GGCCAGGCCA TCGTCGATTC GGTCAAGCAG GGCGATGTGA TCCATTCGAT CACCCTGGAA
GGCGATACCG ACGCCGTGCT GGCCGCCCAG GCCGAGCGCG TGGCGGAGTG GAACAAGCTC
CTCGCCGCCT GA
 
Protein sequence
MSLIATFDTT QGPIKVELFA DKAPLTVANF VNLVKHGFYD GLIFHRVIAD FMIQGGCPKG 
QGTGGPGYKF EDEKNGVKHQ VGSLSMANAG PNTNGSQFFI THIKTDWLDG KHTVFGQVLD
GQAIVDSVKQ GDVIHSITLE GDTDAVLAAQ AERVAEWNKL LAA