| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0756 |
|---|
| Symbol | rplC |
|---|
| ID | 6477859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 886567 |
|---|
| End bp | 887217 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642729906 |
|---|
| Product | 50S ribosomal protein L3 |
|---|
| Protein accession | YP_002027144 |
|---|
| Protein GI | 194364534 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0087] Ribosomal protein L3 |
|---|
| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000000385888 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0180173 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAGA AGTATTCGTT GGGCTTCGTG GGCCGCAAGG CTGGCATGAG CCGCGTGTTC
ACCGAAGATG GTCGTTCCAT CCCGGTGACC CTGATCGAAG CAACCCCGAA CCGCATCGCG
CAGATCAAGA CCGTCGAAAC CGACGGCTAC AGCGCCGTGC AGGTGACCGT CGGCGCGCGT
CGCGCTGCCC TGGTCAACAA GCCGGAAGCC GGCCACTTCG CCAAGGCGAA GGTGGAAGCG
GGTCGTGGCC TGTGGGAATT CCGCGTTGAA GACGCGCAGC TCGGCGATTT CGCCGTTGGC
GGCGAAGTCA AGGCGGACAT CTTCGAAGTC GGCCAGATCG TCGACGTCCA GGGTGTCACC
AAGGGTAAGG GTTTCCAGGG CACCATCAAG CGCCACAACT TCCGTATGGG CGATGCAACC
CACGGTAACT CGCTGTCGCA TCGCGCGCCG GGTTCGCTGG GTCAGCGCCA GACCCCGGGT
CGCGTTTTCC CGGGCAAGAA GATGTCGGGC CACATGGGCG CGGTGCAGCA GAGCACCCAG
AACCTGGAAG TGGTCAAGGT CGACGTGGAG CGCGGTCTGA TCGCGGTTCG CGGCGCCGTT
CCGGGCGCGG CGGGTGGCGA TGTAATCGTC CGTCCGGCGA GCAAGGCATA A
|
|---|
| Protein sequence | MTKKYSLGFV GRKAGMSRVF TEDGRSIPVT LIEATPNRIA QIKTVETDGY SAVQVTVGAR
RAALVNKPEA GHFAKAKVEA GRGLWEFRVE DAQLGDFAVG GEVKADIFEV GQIVDVQGVT
KGKGFQGTIK RHNFRMGDAT HGNSLSHRAP GSLGQRQTPG RVFPGKKMSG HMGAVQQSTQ
NLEVVKVDVE RGLIAVRGAV PGAAGGDVIV RPASKA
|
|---|
| |