Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0723 |
Symbol | |
ID | 6477751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 840707 |
End bp | 842401 |
Gene Length | 1695 bp |
Protein Length | 564 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642729868 |
Product | Tetratricopeptide TPR_2 repeat protein |
Protein accession | YP_002027111 |
Protein GI | 194364501 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.686717 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.618233 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACGA TGCCCGCATT GATTCGCATC CCCAGTGTTC TGCTGCTGTC CCTGGCCTGC GGCCAGGCCC TGGCGGCGGT GCCGGCCAAG GCCCCCGTGC GGGCCCCGGC CACTGAGGAA CTGGCACTGG AACCGGTGAT GGCCGGTGAA TTCGCGCTGC AGGCCGGCAA GCTGGCCGAG GCCGCGCGCT GGTACCTGCA GGCCGCCCAG CAGACCGACG GCGACGCCGG CCTGGCCGAG CGTGCGACCC GTATTTCCAT GCTTGCCAAC GATGATGCCA GCGCGGCAAA GGGCCTGGCC CTGTGGCAGC AGCGCGCCCC GCGTTCGTTG ACCATGCGCA GTGCGGCCGG TGCGCTGGCC ATGCGCCAGG GCGATGTGAA GGCGGCCCGC ACCGAACTGC AGGGCCTGCT GGCCGACCCC GACGAGCGCG GCTGGAAGTT CGCCCTGGCC GCACTGATCG GTGGCGGCCG TGATCCGGCG GTGCCCGCGC AGGTGCTGGG TGAGCTGGTC GACGCCAATG CCATTCCGCC GAAGATCGAA GCCTGGCAGG AGTTTGGCCG CCTTGCCCTG CGCATGGAAA AGCCCGAGCT GGCCCGGCGC ATGATCGATG AAGTGGTCAA GCGCTTCCCG GAAGAGCCAC GTGTGGCGCT GCTGCGTGCC AGCCAGCTGC AGCAGGCGGG CGAGACCGGC AAGGCGTTGT CGCTGCTGCA CGATGTGGAG CCGAAGACCC GCCAGGACCC GGAACTGCGC AATGCGGTGG CCATTGCCTA CGACAGTCTC GGCCAGCCGT CCGCCGCCGA GCGCGTGCTG GCGTTCGGCC CGCAGGACGT GCAGACCTGG GGCATGCGCG CCTCGCTGCT GGCCAAGCAG GGCGACAAGG CCGCGCTTTC CAATCTCTAC AACGAACTGT CGCGGCAGGC GGCCAAGCCG GACCCGGCGC AGCGCCTGCT GCTGGGCAAG ATCGCCGAGT ACCTGAAGCG TTATCCCGAG GCGGTGCAGT GGTACCACAG CGTGCCCGGT GGCGATGAGC TGAGCGAGGC GCGCCTGCGC GCGGCCAATG CCCAGGCCCT GGCCGGGCGT CTGCCACTGG CGCTGGACGA AGTGCATGCG ATCCAGTCCG ATGCGGTGGT CGACGACGAC GTGCGCCGCG ACGCCTACCT GCTGGAAGCC GAGCTGCGCC AGCGCGCCGA CGACAGTGCC GGCGAGCTGG ATGCGCTGGC CCGCGGCCTG GCGGCCTACC CGGATGACAA CGGCCTGCTG TACGCCCGTG CGCTTACCTG GGAGCGTCGC GACGACATTC CGCGTGCCGA GGCCGATCTG CGCAAGATCC TGGTGACCGA GCCGGAGAAC GTGCCGGCTT TGAACGCGCT GGGTTACACC CTGGCCGATC GCACCGGCCG CCTGCAGGAA GCACTGGAGC TGATCGACCG CGCCCGCGTG GCCGAACCGG ACAACGCCGC CATCGTCGAC AGCTACGGCT GGGTGCTGTA TCGCCTGGGC CGCAAGGAAG AGGCACTGGT GCAGCTGCGC CGGGCCTGGA CCCTGGCCAA GGACCCGGAG ATCGCTTCGC ACGTTGGCGA AGTGCTGTGG GTGCTGGGCA AGCACGATGA GGCCCGTCAT TTCTTCGAGG AAGCGGCCAA GCTCGACCCT GAAAACCGCG CGCTGCTGCG CGCCCGCGAG AAATTCAATC CATGA
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Protein sequence | MPTMPALIRI PSVLLLSLAC GQALAAVPAK APVRAPATEE LALEPVMAGE FALQAGKLAE AARWYLQAAQ QTDGDAGLAE RATRISMLAN DDASAAKGLA LWQQRAPRSL TMRSAAGALA MRQGDVKAAR TELQGLLADP DERGWKFALA ALIGGGRDPA VPAQVLGELV DANAIPPKIE AWQEFGRLAL RMEKPELARR MIDEVVKRFP EEPRVALLRA SQLQQAGETG KALSLLHDVE PKTRQDPELR NAVAIAYDSL GQPSAAERVL AFGPQDVQTW GMRASLLAKQ GDKAALSNLY NELSRQAAKP DPAQRLLLGK IAEYLKRYPE AVQWYHSVPG GDELSEARLR AANAQALAGR LPLALDEVHA IQSDAVVDDD VRRDAYLLEA ELRQRADDSA GELDALARGL AAYPDDNGLL YARALTWERR DDIPRAEADL RKILVTEPEN VPALNALGYT LADRTGRLQE ALELIDRARV AEPDNAAIVD SYGWVLYRLG RKEEALVQLR RAWTLAKDPE IASHVGEVLW VLGKHDEARH FFEEAAKLDP ENRALLRARE KFNP
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