Gene Smal_0573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0573 
SymbolglyA 
ID6477477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp684926 
End bp686179 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content66% 
IMG OID642729718 
Productserine hydroxymethyltransferase 
Protein accessionYP_002026961 
Protein GI194364351 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCCGC GTGACGTCCG CATCGAATCC TACGATCCCG AACTGGCCAA GGCCATCGCC 
GCTGAGACCC AGCGCCAGGA AGACCACGTC GAGCTGATCG CCAGCGAGAA CTACACCAGC
CCGGCGGTGA TGGAAGCCCA GGGCAGCCAG CTGACCAACA AGTACGCCGA AGGCTACCCG
GGCAAGCGCT ACTACGGTGG CTGCGAATAC GTGGACATCG CCGAGCAGCT GGCGATCGAC
CGTCTGAAGC AGCTGTTCGG CGCCGACTAC GCCAACGTGC AGCCGCACAG TGGTTCGCAG
GCCAACCAGG CCGTGTACTT CGCCCTGCTG CAGCCGGGTG ACACCATCCT CGGCATGAGC
CTGGCCCACG GCGGCCACCT CACCCACGGT GCCAAGGTGA ACGCCTCGGG CAAGCTGTTC
AACGCCGTGC AGTACGGCGT GAACGACCAG GGCCTGATCG ACTACGACGA AGTCGAGCGC
CTGGCCCTGG AGCACAAGCC GAAGATGGTC GTGGCCGGCT TCTCGGCCTA CTCGCAGGTG
ATCGACTGGG CGCGCTTCCG CGCCATCGCC GACAAGGTCG GTGCCTACCT GTTCGTCGAC
ATGGCACACG TCGCCGGCCT GGTTGCTGCT GGCGTCTACC CGAGCCCGCT GGAACATGCG
CACGTGGTCA CCTCGACCAC CCACAAGACC CTGCGCGGCC CGCGCGGCGG CATCATCGTC
GCCAAGGGCG CCGGCGAAGA CCTGGTCAAG AAGCTGCAGT CGATCGTGTT CCCGGGCATC
CAGGGTGGTC CGCTGATGCA CGTCATCGCC GGCAAGGCCG TGGCCTTCAA GGAAGCGCTG
GAACCGGGCT TCAAGGCCTA CCAGCAGCAG GTGGTGAAGA ACGCCCAGGC GATGGCCAAC
ACGCTCATTG CGCGCGGCTA CAAGATCGTC TCCGGTGGCA CCCAGAACCA CCTGATGCTG
GTCGACATGA TCGGCAAGGA CGTGTCCGGC AAGGACGCGG AAGCCGCGCT GGGCAAGGCC
CACATCACCG TCAACAAGAA CTCGGTGCCG AACGACCCGC GTTCGCCGTT CGTCACTTCG
GGCCTGCGCC TGGGCACCCC GGCGGTGACC ACCCGTGGCT ACGTCGAACA GGACTGCGTG
GACCTGGCCA ACTGGATCGC CGACGTGCTC GACGCGCCGA GCGATGACGC CGTCATCGCC
CGCGTGCGCG ACGCCGTCAG CGCGCAGTGC CGCAAGTACC CGGTCTACGG TTGA
 
Protein sequence
MFPRDVRIES YDPELAKAIA AETQRQEDHV ELIASENYTS PAVMEAQGSQ LTNKYAEGYP 
GKRYYGGCEY VDIAEQLAID RLKQLFGADY ANVQPHSGSQ ANQAVYFALL QPGDTILGMS
LAHGGHLTHG AKVNASGKLF NAVQYGVNDQ GLIDYDEVER LALEHKPKMV VAGFSAYSQV
IDWARFRAIA DKVGAYLFVD MAHVAGLVAA GVYPSPLEHA HVVTSTTHKT LRGPRGGIIV
AKGAGEDLVK KLQSIVFPGI QGGPLMHVIA GKAVAFKEAL EPGFKAYQQQ VVKNAQAMAN
TLIARGYKIV SGGTQNHLML VDMIGKDVSG KDAEAALGKA HITVNKNSVP NDPRSPFVTS
GLRLGTPAVT TRGYVEQDCV DLANWIADVL DAPSDDAVIA RVRDAVSAQC RKYPVYG