| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0547 |
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| Symbol | |
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| ID | 6477451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 652676 |
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| End bp | 653896 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642729692 |
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| Product | type II secretion system protein |
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| Protein accession | YP_002026935 |
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| Protein GI | 194364325 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0476697 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAACT ACCGCTACAA GGCGCTCAAT ACGCACGGCG AGATCTTCGA CGGGCAGATG
GAAGCGGCCA GCGAGGCCGA GCTGGTCGCG CGCCTGCAGG ACCAGGGCCA CCTGCCGATG
GAGACGCAGC TGGCTGACGG CGGCGCGATC GGCGGCAGCA CCTGGCGCAA CCTGTTCCGC
CAACGCCCGC TGCAGGGCGC GGCACTGCTG CAGTTCACCC AGCAGCTGGC GACCCTGCTC
GGTGCCGGCC AGCCATTGGA CCGCGCGTTG TCGATCCTGC TCGGCCTGCC GGAAGACGAA
CGTTCGCGGC GTGCGATCAC CGACATCCGC GACGTGGTGC GCGGTGGTGC GCCGCTGTCC
ACTGCGCTGG AGCGCCAGCA TGGGTTGTTC TCGCGCCTGT ACGTGAACAT GGTGCGTGCC
GGCGAGGCGG GTGGCAGCCT GCACGACACC CTGCAGCGGC TGGCCGACTA CCTTGAACGC
AGTCGTGCAC TGCAGGGCAA GGTGATCAAC GCGCTGGTCT ACCCGGCCAT CCTGCTGGTG
GTAGTGGGCG GTGCACTGCT GTTCCTGCTC GGCTATGTGG TGCCGCAGTT CGCGCAGATG
TACGAGAGCC TGGATGTAGC GCTGCCGTGG TTCACCAACG CGGTGCTGCA GCTGGGCCTG
TTCGTGCGCG ACTGGTGGGT GCTGCTGCTG GTGGTGCCCG CCGTGCTGGC GCTGTTCTTC
GAACGCAAGG CGCGGCAACC GGTGTTCCGC CTGGCGCTGG ATGGCTGGCT GTTGCAGCGG
CGCGGCATCG GCCGCCTGCT GGGCGAACTG GAGACCGCAC GATTGGCACG CACGCTGGGC
ACCCTGCTGC GCAATGGCGT GCCATTGCTG GGTGCGCTGG GCATCGCCCG CAACGTGTTG
GGCAACCGCG CGCTGGCCGC CGATGTGGAA GCAGCCGCGG ACGAAGTGAA GAACGGTACC
GGCCTGTCGC TGGCGCTGTC GCGCGGCAAG CGTTTCCCGC GCTTGGCGCT GCAGATGATC
CAGGTCGGCG AGGAATCCGG TGCACTCGAT ACCATGCTGC TGAAGGCGGC CGATACCTTC
GAACAGGACA GCGCGCGCCG CATCGATCGT CTGCTGGCGG CTATGGTGCC GGCGATCACC
CTGGTGCTGG CCTCGGTGGT CGGTGCGGTG ATCGTTGCCG TGCTGGTGCC GCTGTATGAC
CTGACCAATG CCATCGGTTG A
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| Protein sequence | MPNYRYKALN THGEIFDGQM EAASEAELVA RLQDQGHLPM ETQLADGGAI GGSTWRNLFR
QRPLQGAALL QFTQQLATLL GAGQPLDRAL SILLGLPEDE RSRRAITDIR DVVRGGAPLS
TALERQHGLF SRLYVNMVRA GEAGGSLHDT LQRLADYLER SRALQGKVIN ALVYPAILLV
VVGGALLFLL GYVVPQFAQM YESLDVALPW FTNAVLQLGL FVRDWWVLLL VVPAVLALFF
ERKARQPVFR LALDGWLLQR RGIGRLLGEL ETARLARTLG TLLRNGVPLL GALGIARNVL
GNRALAADVE AAADEVKNGT GLSLALSRGK RFPRLALQMI QVGEESGALD TMLLKAADTF
EQDSARRIDR LLAAMVPAIT LVLASVVGAV IVAVLVPLYD LTNAIG
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