| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0544 |
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| Symbol | |
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| ID | 6477448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 641603 |
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| End bp | 648781 |
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| Gene Length | 7179 bp |
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| Protein Length | 2392 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642729689 |
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| Product | YadA domain protein |
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| Protein accession | YP_002026932 |
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| Protein GI | 194364322 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.14824 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGGA TTTATCGCAA GGTCTGGAAC AAAGCATTGG GTCAGTTGGT GGTGGCCTCG
GAACTGGCCT CCTCCGGCAG CAGCGGCGGG GTCGTCGACC AGCGCCGCGA TGCAACGCAG
GCTGCGCCCG CACGGTTGGC GATGGCACTG GGCCTGGTAT TGGGATTGGG CATGAGCGGT
ATCGCTGCGG CACAGTCGGT GCAGATCGGC GGCAGCGCCA CCTGCGTCGC ATTCAGCGGC
AAGCTGCTCG AAAAGTGCCT GATCGAAGGC ACGGCTACGG CCAAGGGCAG CAACGCGGTG
GCGATCGGCA GCAACAGCAG CGCCAGTGCT GCCAATAGCG TGGCGCTCGG CGCCGGCTCC
AAGGCCACCC GTGCAAACAC CGTGTCCGTC GGTGACACCG GCAAGGAACG GCAGATCACC
AATGTTGCTG CAGGCAGCCA GGCCACCGAT GCGGTGAACA AGGCGCAGCT CGATGCGCAG
GCGCGTGCAA CGCAGGCCGC GCTTGCCGAT GTCGCCGCAG ACGGCAACCG TTATTTCAAG
GCCGACGGCG CAGGCGATGA CAGCGACGCG GCGAAGATCG AAGGGCAGGG CGCCGTGGCG
GCCGGTGCCG GCGCACAGTC GCTGGCCAAT GCGACCACCG CCATCGGTAC CCAGGCCATC
GCTGCCGGCA TCGGCGCGAG TGCGTTCGGC CAAGGCGCAC TCGCGCTCGG CGATGCCAGC
GTCGTGGTCG GGCAGAGTGC CGCGGCATTC GGTCTCGGCG ACACCGCGGT TGGCGCAAGC
GCTACCGCAT CCAGCGAGAA CGGCGCGGCC ACCGCACTCG GCGCGCTGTC CGAAGCCACC
GCTGATGGTG CGACGGCCGT CGGCGGCGGT GCCGTGGCGA TGGGCCCGGG CAGCACCGCA
CTGGGCCGCG GCGCTACCGC CGCCAACGAA GCGTCGATCG CGGTTGGCGC GTTCAGCACC
GCCGTCGGTG AATACAGCAC GGCGCTGGGC TCGAACTCCG CTGCGGTGGC TACCGGCAGC
GTGGCGCTCG GCGCCGGCTC ACTGGCCGAT CGTGTCGATA CCGTGTCCGT CGGTGCCGCC
GAATACGGCC TGACCCGCCA GATCACCAGC GTGGCTGCCG GTACGGAAGA TAACGATGCG
GTCAACGTCG GCCAGTTGAA GGGCGTTGCC GCCGTGGCCG ATGCTACCGC CAAGCGCTTC
CAGGCCACCG GCAGCAGTAA CAGCGATGCC GGTGCGCTGG CCGAGGGCGA CGACGCACTG
GCTGCAGGCG AGGCCGCCAA CGCGATCGGC AACGGTGCTA CTGCAGTTGG CGCGGGTGCC
GGCGCCGTCG CGCAGAACGC CACCGCCGTC GGCAACAACG CGCTGGCCTC GGGCCAGAAC
AGTGCAGCGT TCGGCAACAA CGCACAGGCC AACGGCCCGG GCAGCGTTGC CGTGGGCGGT
GCCGCGGTGG ACGCCAACGG CAACCCGCTG ATCACCAGCG GCGGCGTACC GGTGGAAACC
GGCGCCACCA GCGCCGGCGT CGGTGGCACT GCCGTCGGTG CCAGCGCTGA AGCCAGCGGC
TTTGCCGCGT CGTCCTACGG CGTGGGTGCC TATGCTGCCG GCGCACAGGC GTCGGCGTTC
GGTGCGGTGG CCAATGCCAT CGGCGATTAC TCCACGGCAT TGGGTACGCA GAGCAATGCC
ACCGGCACCA GCAGCGTCGC CATCGGCGGC CCGGCTGATC TGATCCCCGG TCTGGGCTTC
TTCGTGCAGA CCCAGGCCAG TGGCGAAGCC GCGACCGCCG TCGGCGCGGG CGCCATTGCC
AGTGGCGATC GCGCGGTGGC CAACGGCAGC CTGAGCGAGG CCTCCGGTGC CGAAGCCACT
GCGGTCGGCT ACTTCGCCTA TGCACCTGGC GAGAACGCCA GTGCCCTCGG CGCTCAGACC
TGGGCCAGTG GCGCACAGAG CACTGCGGTG GGTTACTACG CCACCGCACG TGGCGCCAAC
AGCGTCGCGC TCGGCGCCAA CTCCGAAGCG GTGCGCGCCA ACAGCGTGGC GGTGGGCAGT
GCCGGCAACG AACGGCAGAT CACCAGCGTT GCCGCCGGCA GCGAAGCCAC CGATGCGGTG
AACAAGGCGC AGTTGGATGC GGTGGCCAAT ACCGCCGACA CCACCGCGCG GTTCTTCCAG
GCGCAGCCGG AAGCTGGCAG CGATGCCGGC GCGCTGGCCG ATGGCGAGGG CGCCATCGCC
GCCGGTTCGT CGAGCAATGC GATCGGTGCG GGTGCCATCG CGCATGGTGC GGCTGCATCC
GCGATCGGCG ATGACAGTGT GGCGGTCGGC CGCAACAGCG CGGCCACCGG CAATGGCGGT
GTCGCCATCG GTGGCCTCGG CCAGGCCTAC GATGAATTCA ACCAGCCGAT CATCGGTGCC
GACGGCAAGG CACAACAGGT CGGCACCACC GCCGTTGCCG ATGCCACCGC AGTCGGCAGC
GGTGCGCAGG CCACCGGAGC CACCAGCACT GCCTTCGGCA ATGCCGCCAA GGCCAGTGGT
GACAACAGCT TCGCCGCCGG CGGCAAGTCA CGTGCCACCG GCAGCTATGC GGTTGCAGTC
GGCGACAGCG CGTTCGCCAG CAGCGATGAC AGCACCGCCG TCGGTGGTTA CAGCTGGGCG
ACCGCCAGTG GCGCAGCAGC ATTCGGTTCG GGTGCATGGG CCACCGCCAC CAACGCGTCG
GCGTTCGGCA ACGCGGCGTG GGCCAGCGGC AGCGGCGCAA CGTCCATCGG TTACAACAGT
TGGGCCAACG GTGCCAGCTC CACCGCCGTC GGTCGCGGGG CCTTCGGCTA TGGCGACAAC
AGCGTGGCGT TGGGCTTCCA GGCGTTGGGC AACAGCATCA ACAGCATCGC CATCGGCACC
AACACGGTGG CCGGTGGTGA GAGTGCGATC GCGCTCGGTG CCGGCAGCAA TGCCAGCGCC
AGCAACACGG TCGCGCTGGG CGCTGGTTCG GTCGCCAACC GCGCGCGCAC GGTGTCGGTG
GGCAGCGCTG GCAACGAACG CCAGGTCACC AACGTCGCCG CCGGCACCCA GGCCACCGAT
GCGGTGAACA AGGCGCAGCT GGATGCGGTT GCGGCCACGG CCACAACCAC CAGTCGCTTC
TTCCAGGCCA GCGGCAATGG CGATGACGTA GCCGGTGCGC TCGTGGACGG TGACAACGCA
CTGGCCGCCG GTGATGCGGC CAATGCCATC GGCAATGGCG CCACTGCGCT GGGCAGCGGC
GCCAATGCGT TGGCCAGCAA TGCGCAGGCG GTGGGCTTCA ATGCCCTGGC CAGCGCGGCC
AATGCCAGCG CCGTCGGCGC CAACGCACAG GCCACCGGTG AGTACGCCAC CGCGCACGGT
GCGGAAAGCG AGGCCAGCGG CGAGCAGAGC GCGGCGTTCG GTGCGGCCAG CATCGCCAGC
GGTGCCGGCA GTACCGCTAC CGGCGTGCTG TCCGAAGCCT CTGGCGAAGA AGCCGTGGCT
GTGGGTTACT TCAGCAATGC CAGCGGTGAC GCGGCAACCG CCGTGGGTAG CGAAAGCGTG
GCCAGTGGCA CGGCGTCAGC GGCCTTCGGT ATCGGTGCCG AAGCCAGCGG CGGTTACAGC
ACCGCCATCG GTGGCTACGC ACAGGCCTCG GCGTTCAACG CCACGGCGTT CGGCAACTTC
GCCAATGCAT CCGGTTCCAA CAGTGTGGCA GTGGGTGGCG ATTCGGAAGC CTCCGGTGCC
TACAGCACCG CCACCGGCCA GGGCAGCCTG GCCACCGGCA CCAACAGCGT CGCCGTTGGC
GGCTCGCTGT TCGGCGTGCT GGCCACCGAG GCATCGGGCA ACTACTCCAC TGCGGTGGGT
GGTGGCGCCT GGTCGGGGGG CATCAACAGC ACCGCACTGG GCAACGCCGC CGAATCGCGC
GGTGCCAACA GCGTGGCGCT GGGTGCGGAC TCGATTGCCG ACCGCGACAA CACCGTGTCG
GTGGGCGGCG GCGGCAATAC CCGCCAGATC ACCAACGTGG CCGATGGCAC CCAGGGCAAC
GACGCGGTCA ACAAGAACCA GCTCGATGCG GTGGCCGCTG CGGCGGAAAA GACCAGCAAG
CAGTTCCAGG CCAGTGGCAA TGCCGATGGC GAAACCGGGG CGCTGGTCGA GGGTGACAAC
GCGCTGGCCG CAGGTGACGC CGCCAATGCC ATCGGCAACG GCGCCACCGC GCTGGGCAGT
GGTGCCAATG CGCTCGCGGC CAACGCCACG GCGGTAGGCA TCGATGCGCT GGCCACCGGC
AGCAACGCGG CTGCCCTGGG CAGCACGGCA CAGGCCACCG GCGAAGACAG CCTGGCGCTC
GGCACCGGCG CCAGCGCCAG TGAACTGGGG GCAAGCGCGG TCGGCGCGCG CGCGCAGGCC
AGCGGTGCAT ACAGCATGGC CACAGGTACA GAAGCCAATG CCAGCGGCAC CCAGGCATTG
GCCAGCGGTT TCCGCAGCGC CGCGTCCGCC GATGGCACTA CCGCTGTCGG CGGCTACGCC
GAAGCCAGCG GTCGCCTCGG CACCGCGTTG GGCTACGGCT CGGCGGCCAG TGGTGCCAAC
ACCACCGCAG TCGGTTTCGG TGCCGCTGCG GCCGGAACCG GTGCCGTTGC CGTGGGTCAG
TCCAGCGAGG CCAGTGGCGA GGAGAGCGTG GCCATCGGTG GCAGCACCTT CTTCGGCCTG
ATCCCCTCGC GTGCCAGTGG CACCGGTGCC GCGGCATTCG GTGCGGGCGC GTGGGCCACC
GAAGACTACG CCACGGCGAT CGGCTGGAAT TCGTGGGCGG CAGGCGGCAG CGCCACCGCA
CTGGGTGCCA ATGCCACCGC CAATGGCAGC AACAGCGTCG CGCTCGGCGC CGGTTCCAAG
GCCGACCGTG ACAACACGGT GGCCGTCGGC AAGGCGGGCG GTGAGCGCCA GGTAACCCAT
GTCGCAGCAG GCAGCGAAGC CACCGATGCG GTGAACAAGG GCCAGCTGGA TGCAGTGGCC
AGCGTCGCCG ACAAGACCAG CCGCCAGTTC CAGGCCAGCG GCAATGCCGA TGGCGAGGCC
GGTGCACTGG TGGACGGTGA CAACGCACTG GCTGCCGGTA ATGCGGCCAA CGCCATCGGC
AACGGCGCCA CCGCACTGGG CAGCGGTGCC AACGCGATGG CGGCCAATGC CACCGCGGTG
GGCTTCGATG CGCTGGCCAC CGGCAACAAT GCCGCTGCAC TGGGTAACAC GGCGCAGGCC
AGCGGTGTCG ACAGCGTCGC CCTCGGCAGT GGCGCCAGTG CCAGTGAGCT GGGTGCCAGC
GCCACCGGTG CCGGCGCCCA GGCCAAGGGC GCCTACAGCA CCGCCAGCGG TGCGCAGGCC
ACCGCCAGCG GCACGCAGTC GCAGGCCAAT GGTTTCCGCG CCAGCGCGTC GGCCGACGGC
GCATCGGCCA TCGGTAGCTA CGCCGATGCC AGCGGCCGTC TTGGCACCGC AGTCGGTTAT
GGCAGCAAGG CCACCGGCGC CAACGCGACG GCGGTTGGTG TCAGCGCCAA TGCCAGCGCT
GCCGGCAGCG TCGCGCTGGG TGCTGGTTCG GTTGCCGACC GTGCCAACAC CGTGTCGGTC
GGCAGTGCCA GCAGCGATCG CCAGATCACC CGTGTCGCCG CCGGTACCGA GCGTACCGAT
GCGGTCAACC GTGGCCAGCT GGATGCCGTT GCCGCCACCG CAGACGGCAC GGCGCGCTAC
GTCAAGGCCA CCGGCAGCGG CACGGCCAGC GCCAGCGGTA CCGACGCCGC AGCCATCGGT
TCGGCAGCCA GCGCCAGTGG TGCGCGCAGC AACGCGCTGG GTGCCAATGC GCTGGCCATC
GGCAACGGTG CATTGGCCCT GGGTACCAGC GCCGGTGCAA CGGGTGCCAA CTCGGTCGCG
CTCGGCGCGG GTTCGCGAGC GCTCGATGCC AACGTGGTGT CGGTCGGTGG TGGCAACGGC
ACCGATGGTC CGGCCACGCG CCGCATCGTC AATGTGGCCG ATGGCCGCAT CGCCGCCGGC
AGCACCGATG CGATCACCGG TTCGCAGCTC AACGTCACCA ACCAGCGCGT GGGCGCGGTG
GAAACCCGCG TCGGTGATTT CGATTCGCGC ATCACCACCG TTGAAACCAC GGCGGCCAGC
GCGGTGGGCT ACGACGACGC CAGCCGTGAT CGCCTGACCC TGTCCGGCTT CCAGGGCACC
ACCATCGACA ACGTCGGTGC AGGCAGCATT GCCGCCGGCA GCCGTCAGGC GATCAACGGC
GGCCAGTTGT TCCAGTCGCT CAGTGATGCA GCCAGCTTCC TCGGTGGTGG TGCCAGCGTC
GGTATGCAGG GCGTGTTCGT GGCGCCGAAC TATGTGATCC AGGGCGCCAC CTACAGCAAC
GTCGGCGATG CATTGGGTGC GCTGGACCGC AAGGTCAGCG AGATCGACCG CCGCAGCGCC
GGTGGCACGC GTGCCGGTGC GTCCAGCCTG CGCGCGATGA GCGCCTCGCT GGATGACACT
TCGTTGGCCA GCACTGCCGA TGCCCCGGTG GCGGCGGATG CGGCAGCGGC CAGCACCGCA
CGCGTGCAGG GCACGCCGAC GGCTGCCGCA GCAGGTGCCG GCATTCCGGT GGGTACGCCG
GGAAGCGGCG CCAACTCGGT CACTGTGGGT GATGGCGCCG TGGCCAGCGG GGCTTCCTCG
ACCGCGATCG GCCAGGGCGC TACCGCCACA GCAACCAACG CCATTGCATT GGGCCAGGGC
TCGCTCGCCG ACCGTGCCAA TACGATCTCG GTGGGCAGCG AGGGCAACGA GCGCCAGGTC
ACCAACGTGG CGGCCGGTAC CACGGCTACC GATGCGGTCA ACAAGGGCCA GCTTGATCGT
GGCATGGCCA CGGCCAACAG CTACACCGAC AGCCGCGTCC AGGCCGTCAC CGACAGCTTC
GATGTGTTCA AGGGCGAGAT CGACGGACGC CTGCGCCACA TGGATCGCCG CATCGACCGC
CAGGGCGCGA TGAGCGCTGC AATGCTCAAC ATGGCCACCA GTGCTGCCGG TATCCGTACC
CAGAACCGGG TCGGCGTCGG CATCGGTTTC CAGGGCGGCG AATCGGCGTT GTCGCTGGGC
TACCAGCGTG CGATCAGCGA TCGCGCCACG GTCACCTTCG GCGGTGCCTT CAGCAGTGAC
GACAGCTCGG TTGGCGTCGG TGCCGGCTTC GGCTGGTAA
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| Protein sequence | MNRIYRKVWN KALGQLVVAS ELASSGSSGG VVDQRRDATQ AAPARLAMAL GLVLGLGMSG
IAAAQSVQIG GSATCVAFSG KLLEKCLIEG TATAKGSNAV AIGSNSSASA ANSVALGAGS
KATRANTVSV GDTGKERQIT NVAAGSQATD AVNKAQLDAQ ARATQAALAD VAADGNRYFK
ADGAGDDSDA AKIEGQGAVA AGAGAQSLAN ATTAIGTQAI AAGIGASAFG QGALALGDAS
VVVGQSAAAF GLGDTAVGAS ATASSENGAA TALGALSEAT ADGATAVGGG AVAMGPGSTA
LGRGATAANE ASIAVGAFST AVGEYSTALG SNSAAVATGS VALGAGSLAD RVDTVSVGAA
EYGLTRQITS VAAGTEDNDA VNVGQLKGVA AVADATAKRF QATGSSNSDA GALAEGDDAL
AAGEAANAIG NGATAVGAGA GAVAQNATAV GNNALASGQN SAAFGNNAQA NGPGSVAVGG
AAVDANGNPL ITSGGVPVET GATSAGVGGT AVGASAEASG FAASSYGVGA YAAGAQASAF
GAVANAIGDY STALGTQSNA TGTSSVAIGG PADLIPGLGF FVQTQASGEA ATAVGAGAIA
SGDRAVANGS LSEASGAEAT AVGYFAYAPG ENASALGAQT WASGAQSTAV GYYATARGAN
SVALGANSEA VRANSVAVGS AGNERQITSV AAGSEATDAV NKAQLDAVAN TADTTARFFQ
AQPEAGSDAG ALADGEGAIA AGSSSNAIGA GAIAHGAAAS AIGDDSVAVG RNSAATGNGG
VAIGGLGQAY DEFNQPIIGA DGKAQQVGTT AVADATAVGS GAQATGATST AFGNAAKASG
DNSFAAGGKS RATGSYAVAV GDSAFASSDD STAVGGYSWA TASGAAAFGS GAWATATNAS
AFGNAAWASG SGATSIGYNS WANGASSTAV GRGAFGYGDN SVALGFQALG NSINSIAIGT
NTVAGGESAI ALGAGSNASA SNTVALGAGS VANRARTVSV GSAGNERQVT NVAAGTQATD
AVNKAQLDAV AATATTTSRF FQASGNGDDV AGALVDGDNA LAAGDAANAI GNGATALGSG
ANALASNAQA VGFNALASAA NASAVGANAQ ATGEYATAHG AESEASGEQS AAFGAASIAS
GAGSTATGVL SEASGEEAVA VGYFSNASGD AATAVGSESV ASGTASAAFG IGAEASGGYS
TAIGGYAQAS AFNATAFGNF ANASGSNSVA VGGDSEASGA YSTATGQGSL ATGTNSVAVG
GSLFGVLATE ASGNYSTAVG GGAWSGGINS TALGNAAESR GANSVALGAD SIADRDNTVS
VGGGGNTRQI TNVADGTQGN DAVNKNQLDA VAAAAEKTSK QFQASGNADG ETGALVEGDN
ALAAGDAANA IGNGATALGS GANALAANAT AVGIDALATG SNAAALGSTA QATGEDSLAL
GTGASASELG ASAVGARAQA SGAYSMATGT EANASGTQAL ASGFRSAASA DGTTAVGGYA
EASGRLGTAL GYGSAASGAN TTAVGFGAAA AGTGAVAVGQ SSEASGEESV AIGGSTFFGL
IPSRASGTGA AAFGAGAWAT EDYATAIGWN SWAAGGSATA LGANATANGS NSVALGAGSK
ADRDNTVAVG KAGGERQVTH VAAGSEATDA VNKGQLDAVA SVADKTSRQF QASGNADGEA
GALVDGDNAL AAGNAANAIG NGATALGSGA NAMAANATAV GFDALATGNN AAALGNTAQA
SGVDSVALGS GASASELGAS ATGAGAQAKG AYSTASGAQA TASGTQSQAN GFRASASADG
ASAIGSYADA SGRLGTAVGY GSKATGANAT AVGVSANASA AGSVALGAGS VADRANTVSV
GSASSDRQIT RVAAGTERTD AVNRGQLDAV AATADGTARY VKATGSGTAS ASGTDAAAIG
SAASASGARS NALGANALAI GNGALALGTS AGATGANSVA LGAGSRALDA NVVSVGGGNG
TDGPATRRIV NVADGRIAAG STDAITGSQL NVTNQRVGAV ETRVGDFDSR ITTVETTAAS
AVGYDDASRD RLTLSGFQGT TIDNVGAGSI AAGSRQAING GQLFQSLSDA ASFLGGGASV
GMQGVFVAPN YVIQGATYSN VGDALGALDR KVSEIDRRSA GGTRAGASSL RAMSASLDDT
SLASTADAPV AADAAAASTA RVQGTPTAAA AGAGIPVGTP GSGANSVTVG DGAVASGASS
TAIGQGATAT ATNAIALGQG SLADRANTIS VGSEGNERQV TNVAAGTTAT DAVNKGQLDR
GMATANSYTD SRVQAVTDSF DVFKGEIDGR LRHMDRRIDR QGAMSAAMLN MATSAAGIRT
QNRVGVGIGF QGGESALSLG YQRAISDRAT VTFGGAFSSD DSSVGVGAGF GW
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