| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0483 |
|---|
| Symbol | |
|---|
| ID | 6478435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 568924 |
|---|
| End bp | 570051 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642729628 |
|---|
| Product | twitching motility protein |
|---|
| Protein accession | YP_002026871 |
|---|
| Protein GI | 194364261 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
|---|
| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATCG GCTACTTCCT GAAGCTGATG ACCGAAAAGA ACGCTTCGGA CATGTTTCTG
ACCACCGGGG CACCGGTCTA CATCAAGATC GAGGGGAAGC TCTATCCGCT GGGCAATACT
GGCCTGCCGC CGGGCATGGT CAAGAAGATC GCCTACTCGC TGATGGACGA AGGCCAGGTG
CCGCAGTTCG AGCGCGAGCT GGAGCTGAAC ATGGCCATCG CCCTGCCTGA TGCGGGGCGC
TTCCGGGTCA ATGTATTCAA GCAGCGCGGC GAAGTCGGCA TGGTCATTCG CGCCATCCGC
AGCCGCATCC CGAGCATTGA AGAGCTGAAC CTGCCGCAGG TGCTGAAGGA CGTCATCATG
ACCCCGCGCG GGCTGGTGCT GGTGGTGGGG TCCACCGGTT CCGGCAAATC CACCTCGCTG
GCGTCGATGA TCGACCACCG CAACAGCACT ACCACCGGCC ACATCCTCAC CATCGAGGAC
CCGATCGAGT ACCTGCACAA GCACAAGATG TCGATCGTCA ACCAGCGCGA GGTCGGGCTG
GACACCCATG CCTTCCACAA CGCGCTGAAG AATGCGATGC GCGAGGCGCC GGACGTGATC
CTGATCGGCG AGATCCTGGA CGCGGAAACG ATGGAGGCGG CGATCGCCTT CGCTGAGACC
GGTCACCTGT GCCTGGCCAC CCTGCACTCC AACAATGCCG ACCAGACCAT CGAGCGCATC
CTCAACTTCT TCCCGGAAAG CGCGCACAAG AACGTGCTGA TGAACCTCGC GCTGAACCTG
CGCGCGGTGG TCAGCCAGCG CCTGGTGAAG AACAAGGAAG GCCGCCGGCT GCCGGCCACA
GAGGTCCTGA TCAATACGCC GATGATCCGC GACCTGCTGC GCCGCGGCCA GGTGCACGAG
ATCAAGGCCG CGATGGAAGG CTCGCTGGAA GAAGGCATGG AGAGCTTCGA CCAGTGCCTG
TTCCGGTTGG CCAAGGCCGG CACCATCGAG CAGGAGGAAG CATTGCGCGC GGCCGACTCA
CGCGATGGCC TGGCCCTGAA GTTCCGCCTG TCCGAAGGCA GCAGCGGCGA GCACGACCCG
TACGCCGACT TCTCGGCCGG TGCGCCCAGC ATCACCCACG GATTCTGA
|
|---|
| Protein sequence | MDIGYFLKLM TEKNASDMFL TTGAPVYIKI EGKLYPLGNT GLPPGMVKKI AYSLMDEGQV
PQFERELELN MAIALPDAGR FRVNVFKQRG EVGMVIRAIR SRIPSIEELN LPQVLKDVIM
TPRGLVLVVG STGSGKSTSL ASMIDHRNST TTGHILTIED PIEYLHKHKM SIVNQREVGL
DTHAFHNALK NAMREAPDVI LIGEILDAET MEAAIAFAET GHLCLATLHS NNADQTIERI
LNFFPESAHK NVLMNLALNL RAVVSQRLVK NKEGRRLPAT EVLINTPMIR DLLRRGQVHE
IKAAMEGSLE EGMESFDQCL FRLAKAGTIE QEEALRAADS RDGLALKFRL SEGSSGEHDP
YADFSAGAPS ITHGF
|
|---|
| |