Gene Smal_0408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0408 
Symbol 
ID6478278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp487716 
End bp489797 
Gene Length2082 bp 
Protein Length693 aa 
Translation table11 
GC content70% 
IMG OID642729553 
ProductSMP-30/Gluconolaconase/LRE domain protein 
Protein accessionYP_002026796 
Protein GI194364186 
COG category[S] Function unknown 
COG ID[COG3391] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.785735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.15039 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGGT GGCAATGGAT GGCGGCAGGG GTCGCGTTGG CAACGGCGGT GGCATTGGCC 
GCGACCTGGT GGGATTCACC GCTGCAGACC TTGGCTGAAC CGGCAGGCCC GGCGCCCACG
CCACTGGCCT GGACCGCGCA GATCGAGATG CTGGCCGGCG ACGGTCATCC CGGTGACCGC
GATGGTGCGT CCGCGCAGGC CCGCTTCGCC GATCCCTATG CGTTGCTGCG CAGTGCCGAT
GGCAGCATCT ACTTCACCGA TGCCGGCGAC AACAACCGCA TCCGCCGCCG CCAGCCGGAT
GGCCGCATCG AGACCGTGGC CGGGCAGGGC GAGGGGCGCA TCGATGGCCC GGCGCTGCAG
GCCAGCTTCA ATACGCCGTC GGGCATCGCC GCCGATGCGC AGGGCAACCT GTACGTGGCC
GACACCGGCA ACCATGCCAT CCGCCGCATC GGCACCGATG GCCAGGTGAC CACGCTGGCC
GGTGGCGAGC AGGGGTACGC CGATGGACCG GCCGCGCAAG CGCGCTTCGA TGCACCGATG
GGCATCGCGG TGGACGCGCA GGGCCAGGTC TATGTGGCCG ACACCTTCAA CGACCGCATC
CGGGTGATCG GCACCGACGG CAACGTGCGT ACCCTGGCCG GCGGCGAGCG CCCGGGGCTG
GCCGATGGCC TGGGCGTCGC GGCGCGCTTC GATACGCCGG TGGCGCTGGC CTTCGATGCC
CATGGCGCGC TGCTGGTGGC CGACCTGTTC AACAATGCGG TGCGTCGGGT CGGTGCCGAC
GGCATGGTCA GCACGCTGCT GGGCGATGGC GGCGTGATCA ATGGGCCGTT GTCGCTGGCC
ACCACGCACG ACGGCGTGCT GTACGTGGGT GACCTTGATG GCCGCATCGT GCAGGTAACA
CCGCAGGGCC ACCAGATCGC GCTGGTGGGC AACGGCCGCC TGCCACGCCT GGCCCGCCCC
AGTGGTCTGG CGATGGATGC CGATGGCAGC GTGCTGGTCG CCGATTCCGC CAGCTATCGC
CTGCACCGCC TGCGCCCGCT GCCGGTGGGT GATTTGCCGG CACCGGCGCT GGTCGGGCCC
GCTGCCGATG CAGCGTTGCC GGACACCGGT GGGCGCTGGC CGTTGGCACC CCAGGACGGC
TGGCATGAAG TGGTGGGCAC GCTGGGCGAG GTGCGCGGCA ACTTCAAGGG CGAGAGCCGC
CACCACCTGC ACGGTGGTTT CGATGTGCGC GGCGATGTCG GCCAGACCGT GTTGGCGATC
GCCGATGGCA AGATCAGCAG CCCGGTAGCG GCGTGGAGCC TGGGTGGGCA GGCCGAGGGC
CTGGCAGTGG ACCGCCTCAA GTACATCCAC ATGCGGGTCG GCCGCACCCC GCGTGACCAG
CCGTTCGATG CGCGCTGGCA GGCGCTGTAC GACGAGCAGG GCAAGCTGGA GCGGATGCGC
GTGCGTCGCG GCACGCGCAT CCACGTTGGC GATCGCCTGG GCAGCATCAA CAACCAGGCG
CACGTGCACC TGGCGGTGGG CACCGGCGGC TTCGAAACCA ACGCCGTGGC GCTGGGTTTC
CATAACTACG CCGACCACTT CGCACCGCGC ATCACCGATG TGGCGCTGCT GGACGACAAC
GACCAGCCGC TGGCGGCGGG CAGCGACGGC GTGGTGATGC TGGCGCGGCA GGGACGTGGC
GTGCAGATCG TGGTCGAGGC CTGGGACCAG GTCGACAACA ACCTGCCGCG GCGCCGGCTG
GGCATGTACC AGGTGGGCTA CCAGATCCTC GATGCTGGGG GACAGCCGCT GCAGGGTTAC
GAGCAGCCGC GCTGGAACAT CGTGTTCAAC CGCATGCCGC CGCAGATGGA AGCGGTGCGC
GTGGCCTACG CACCGGACAG CGGTATCACG GTGCATGGCA GTGCGGTGAC CCGGTTCCGT
TACCTGGCCA CCAACACCGT GCGTGATGGC CTGATGGAAA CCGGGCGCTG GCAGCCGGCG
GCGCTGCCGC CGGGCGAGTA CATCGTGCGC GCCAGCGTGC GCGACTACAG CGGTAACGAA
GGCGTGGGCC CGCGCGAGAT CAGGGTACGG CTGCTGCCAT AG
 
Protein sequence
MARWQWMAAG VALATAVALA ATWWDSPLQT LAEPAGPAPT PLAWTAQIEM LAGDGHPGDR 
DGASAQARFA DPYALLRSAD GSIYFTDAGD NNRIRRRQPD GRIETVAGQG EGRIDGPALQ
ASFNTPSGIA ADAQGNLYVA DTGNHAIRRI GTDGQVTTLA GGEQGYADGP AAQARFDAPM
GIAVDAQGQV YVADTFNDRI RVIGTDGNVR TLAGGERPGL ADGLGVAARF DTPVALAFDA
HGALLVADLF NNAVRRVGAD GMVSTLLGDG GVINGPLSLA TTHDGVLYVG DLDGRIVQVT
PQGHQIALVG NGRLPRLARP SGLAMDADGS VLVADSASYR LHRLRPLPVG DLPAPALVGP
AADAALPDTG GRWPLAPQDG WHEVVGTLGE VRGNFKGESR HHLHGGFDVR GDVGQTVLAI
ADGKISSPVA AWSLGGQAEG LAVDRLKYIH MRVGRTPRDQ PFDARWQALY DEQGKLERMR
VRRGTRIHVG DRLGSINNQA HVHLAVGTGG FETNAVALGF HNYADHFAPR ITDVALLDDN
DQPLAAGSDG VVMLARQGRG VQIVVEAWDQ VDNNLPRRRL GMYQVGYQIL DAGGQPLQGY
EQPRWNIVFN RMPPQMEAVR VAYAPDSGIT VHGSAVTRFR YLATNTVRDG LMETGRWQPA
ALPPGEYIVR ASVRDYSGNE GVGPREIRVR LLP