Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0408 |
Symbol | |
ID | 6478278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 487716 |
End bp | 489797 |
Gene Length | 2082 bp |
Protein Length | 693 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642729553 |
Product | SMP-30/Gluconolaconase/LRE domain protein |
Protein accession | YP_002026796 |
Protein GI | 194364186 |
COG category | [S] Function unknown |
COG ID | [COG3391] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.785735 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.15039 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGGT GGCAATGGAT GGCGGCAGGG GTCGCGTTGG CAACGGCGGT GGCATTGGCC GCGACCTGGT GGGATTCACC GCTGCAGACC TTGGCTGAAC CGGCAGGCCC GGCGCCCACG CCACTGGCCT GGACCGCGCA GATCGAGATG CTGGCCGGCG ACGGTCATCC CGGTGACCGC GATGGTGCGT CCGCGCAGGC CCGCTTCGCC GATCCCTATG CGTTGCTGCG CAGTGCCGAT GGCAGCATCT ACTTCACCGA TGCCGGCGAC AACAACCGCA TCCGCCGCCG CCAGCCGGAT GGCCGCATCG AGACCGTGGC CGGGCAGGGC GAGGGGCGCA TCGATGGCCC GGCGCTGCAG GCCAGCTTCA ATACGCCGTC GGGCATCGCC GCCGATGCGC AGGGCAACCT GTACGTGGCC GACACCGGCA ACCATGCCAT CCGCCGCATC GGCACCGATG GCCAGGTGAC CACGCTGGCC GGTGGCGAGC AGGGGTACGC CGATGGACCG GCCGCGCAAG CGCGCTTCGA TGCACCGATG GGCATCGCGG TGGACGCGCA GGGCCAGGTC TATGTGGCCG ACACCTTCAA CGACCGCATC CGGGTGATCG GCACCGACGG CAACGTGCGT ACCCTGGCCG GCGGCGAGCG CCCGGGGCTG GCCGATGGCC TGGGCGTCGC GGCGCGCTTC GATACGCCGG TGGCGCTGGC CTTCGATGCC CATGGCGCGC TGCTGGTGGC CGACCTGTTC AACAATGCGG TGCGTCGGGT CGGTGCCGAC GGCATGGTCA GCACGCTGCT GGGCGATGGC GGCGTGATCA ATGGGCCGTT GTCGCTGGCC ACCACGCACG ACGGCGTGCT GTACGTGGGT GACCTTGATG GCCGCATCGT GCAGGTAACA CCGCAGGGCC ACCAGATCGC GCTGGTGGGC AACGGCCGCC TGCCACGCCT GGCCCGCCCC AGTGGTCTGG CGATGGATGC CGATGGCAGC GTGCTGGTCG CCGATTCCGC CAGCTATCGC CTGCACCGCC TGCGCCCGCT GCCGGTGGGT GATTTGCCGG CACCGGCGCT GGTCGGGCCC GCTGCCGATG CAGCGTTGCC GGACACCGGT GGGCGCTGGC CGTTGGCACC CCAGGACGGC TGGCATGAAG TGGTGGGCAC GCTGGGCGAG GTGCGCGGCA ACTTCAAGGG CGAGAGCCGC CACCACCTGC ACGGTGGTTT CGATGTGCGC GGCGATGTCG GCCAGACCGT GTTGGCGATC GCCGATGGCA AGATCAGCAG CCCGGTAGCG GCGTGGAGCC TGGGTGGGCA GGCCGAGGGC CTGGCAGTGG ACCGCCTCAA GTACATCCAC ATGCGGGTCG GCCGCACCCC GCGTGACCAG CCGTTCGATG CGCGCTGGCA GGCGCTGTAC GACGAGCAGG GCAAGCTGGA GCGGATGCGC GTGCGTCGCG GCACGCGCAT CCACGTTGGC GATCGCCTGG GCAGCATCAA CAACCAGGCG CACGTGCACC TGGCGGTGGG CACCGGCGGC TTCGAAACCA ACGCCGTGGC GCTGGGTTTC CATAACTACG CCGACCACTT CGCACCGCGC ATCACCGATG TGGCGCTGCT GGACGACAAC GACCAGCCGC TGGCGGCGGG CAGCGACGGC GTGGTGATGC TGGCGCGGCA GGGACGTGGC GTGCAGATCG TGGTCGAGGC CTGGGACCAG GTCGACAACA ACCTGCCGCG GCGCCGGCTG GGCATGTACC AGGTGGGCTA CCAGATCCTC GATGCTGGGG GACAGCCGCT GCAGGGTTAC GAGCAGCCGC GCTGGAACAT CGTGTTCAAC CGCATGCCGC CGCAGATGGA AGCGGTGCGC GTGGCCTACG CACCGGACAG CGGTATCACG GTGCATGGCA GTGCGGTGAC CCGGTTCCGT TACCTGGCCA CCAACACCGT GCGTGATGGC CTGATGGAAA CCGGGCGCTG GCAGCCGGCG GCGCTGCCGC CGGGCGAGTA CATCGTGCGC GCCAGCGTGC GCGACTACAG CGGTAACGAA GGCGTGGGCC CGCGCGAGAT CAGGGTACGG CTGCTGCCAT AG
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Protein sequence | MARWQWMAAG VALATAVALA ATWWDSPLQT LAEPAGPAPT PLAWTAQIEM LAGDGHPGDR DGASAQARFA DPYALLRSAD GSIYFTDAGD NNRIRRRQPD GRIETVAGQG EGRIDGPALQ ASFNTPSGIA ADAQGNLYVA DTGNHAIRRI GTDGQVTTLA GGEQGYADGP AAQARFDAPM GIAVDAQGQV YVADTFNDRI RVIGTDGNVR TLAGGERPGL ADGLGVAARF DTPVALAFDA HGALLVADLF NNAVRRVGAD GMVSTLLGDG GVINGPLSLA TTHDGVLYVG DLDGRIVQVT PQGHQIALVG NGRLPRLARP SGLAMDADGS VLVADSASYR LHRLRPLPVG DLPAPALVGP AADAALPDTG GRWPLAPQDG WHEVVGTLGE VRGNFKGESR HHLHGGFDVR GDVGQTVLAI ADGKISSPVA AWSLGGQAEG LAVDRLKYIH MRVGRTPRDQ PFDARWQALY DEQGKLERMR VRRGTRIHVG DRLGSINNQA HVHLAVGTGG FETNAVALGF HNYADHFAPR ITDVALLDDN DQPLAAGSDG VVMLARQGRG VQIVVEAWDQ VDNNLPRRRL GMYQVGYQIL DAGGQPLQGY EQPRWNIVFN RMPPQMEAVR VAYAPDSGIT VHGSAVTRFR YLATNTVRDG LMETGRWQPA ALPPGEYIVR ASVRDYSGNE GVGPREIRVR LLP
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