Gene Smal_0310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0310 
Symbol 
ID6478106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp377117 
End bp378079 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content65% 
IMG OID642729455 
Productcytochrome c oxidase, subunit II 
Protein accessionYP_002026698 
Protein GI194364088 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID[TIGR02866] cytochrome c oxidase, subunit II 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0572725 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAA GCAGAGGGTG GGGCACGAAG TGCGTTGCAA TGGTCGCCAC GATGGCGGCT 
CTGCTGTCGA TGCCGGGGAC GGCACTGGCC CAGGCGGCCG ATCCAAAACC GTGGCAGCTG
AACATGGGCA AGGGGGTGAC CCAGACCTCA CGCCTGGCCT GGGAATCGAA CAATCTCTCG
CTGATCGTCT GTACGGTGAT CGGCGTGATC GTGTTCGGCG CCATGGCCTA CGCCATGTTC
AAGTTCCGCA AGTCGAAGGG CGCGGTGGCC GCCACCTTCA GCCACAACAC CAAGGCCGAA
ATCATCTGGA CAGTGATCCC GGTGATCATC CTGGTGGTGA TGGCGTGGCC GGCCACGGCC
AACCTGATCA AGATGTACGA CACCCGCGAT GCCGAGATGA CGGTGAAGGT CACCGGCTAC
CAGTGGATGT GGAAGTACGA GTATCTCGGT GAGAACGTCA CCTTCACCAG CCGCCTGGAC
CGCGAGTCCG ACCGCGTGCG GCAGAGCGGG GTCGTGCCGA CCCGTGAGAG CCATCCGCAT
TACCTGCTGG ATGTCGACAA CCGGCTGGTG CTGCCGGTCG ATACCAAGGT GCGCTTCGTC
ATCACCTCCG ACGACGTGAT CCACGCCTGG TGGGTACCGG CACTGGGCTG GAAGCAGGAC
GCCATCCCCG GTTTCATCAA TGAAGCCTGG ACCAGCATCG AGCAGCCCGG CGTCTACCGC
GGCCAGTGCG CCGAGCTGTG CGGCAAGGAC CATGGCTTCA TGCCGATCGT GGTCGAGGCG
GTGTCCAAGG AGGAGTTCAA ACAGTGGCTG GCGCAGCGCA AGCCGGCGCC GCCCGCTGGG
CCGGCAACGC CGGCGGCACC TGCCGAACCG GCTGCACCGG CTGCACCGGC GAGCGAGGCA
CCGGCTGCGC CTGCTGCTGC AGAAGCGGGC AGCGCACCTG CCACCGCTGC CAGCGGCGCG
TGA
 
Protein sequence
MKQSRGWGTK CVAMVATMAA LLSMPGTALA QAADPKPWQL NMGKGVTQTS RLAWESNNLS 
LIVCTVIGVI VFGAMAYAMF KFRKSKGAVA ATFSHNTKAE IIWTVIPVII LVVMAWPATA
NLIKMYDTRD AEMTVKVTGY QWMWKYEYLG ENVTFTSRLD RESDRVRQSG VVPTRESHPH
YLLDVDNRLV LPVDTKVRFV ITSDDVIHAW WVPALGWKQD AIPGFINEAW TSIEQPGVYR
GQCAELCGKD HGFMPIVVEA VSKEEFKQWL AQRKPAPPAG PATPAAPAEP AAPAAPASEA
PAAPAAAEAG SAPATAASGA