Gene Smal_0300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0300 
Symbol 
ID6478085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp351295 
End bp352506 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content67% 
IMG OID642729434 
Producttyrosyl-tRNA synthetase 
Protein accessionYP_002026688 
Protein GI194364078 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0162] Tyrosyl-tRNA synthetase 
TIGRFAM ID[TIGR00234] tyrosyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00139945 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0172609 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCTCGA TTGAAGAAGC CCTTGCCCTG ATCGGCCGTG GTGCCGACGA GATCCTCAAG 
CTCGAGGATC TGCGTGCGCG CCTGCAGGAA GGCCGCCCGC TGCGGATCAA GGCCGGCTTC
GACCCCACCG CGCCCGACCT GCACCTGGGC CATACGGTGC TGCTGAACAA GATGCGCCAG
TTCCAGGACC TCGGCCATCA GGTCATTTTC CTGATCGGCG ACTTCACCGG CATGATCGGC
GACCCGTCCG GCAAGAGCCT GACCCGCAAG CCGCTCAGCA AGGACGACGT GCTGGCCAAT
GCCCGTACCT ATGAAGAGCA GGTGTTCAAG GTGCTGGACC GCAGCCGTAC CGAAGTCCGC
TTCAACTCGG AGTGGTTCGG CAAGATGGGC GCGGCCGACA TGATCCGCCT GGCCGGCCAG
CACACCGTGG CGCGCATGCT CGAGCGCGAC GATTTCGCCA AGCGCTACGC CGCCCAGCAG
TCCATCGCCA TCCACGAGTT CCTGTACCCG CTGGTGCAGG GCTACGACTC TGTGGCCCTG
GAAGCGGACG TCGAGCTCGG CGGTACCGAC CAGAAGTTCA ACCTGCTGAT GGGCCGCGGC
CTGCAGGAGC ACCACGGCCA GAAGCCGCAG GTGGTGCTGA CCATGCCGCT GCTGGAAGGC
CTGGATGGCG TCAACAAGAT GTCCAAGTCG CTGGGCAACT ACATTGGTAT CAGCGAGCCG
GCCATCGACA TCGTCACCAA GACCATGAAG GTGGACGACA CCCTGATGTG GCGCTGGATC
GAGCTGCTGT CCTTCGACAT CAGCCAGGCC GAAGCCGTGC AGCTGCGCGA GCAGGTGGCC
AATGGCGGCC TGAACCCGCG CGTGGTCAAG CTGCGCCTGG CGCGTGAACT GGCGACCCGC
TTCCATGACG CCGCAGCGGC CGAACAGGCG GTTGCCGGTT GGGAGGCGGC GGTGACCGGG
CAGGGCGACA TCACCCAGCT GCCGCTGCAG GACGTGGCGA TCCCGGCCGA AGGCCTGCGC
ATCGCCGCGC TGCTGACGGC GGCCGGCCTG ACCCCGAGCA ACTCCGAAGC CAACCGCAAG
CTCAAGGAGC GTGCGGTCAA GGTGGACGGT GAAGTGGTGG AAGACGGCCA GCAGGTGCTG
CAGCCGGGCT TCGAAGGCCT GCTGCAGGTC GGCAAGCGCA CCTTCGCCCG CGTGCGCCTG
GTCGCTGCCT GA
 
Protein sequence
MSSIEEALAL IGRGADEILK LEDLRARLQE GRPLRIKAGF DPTAPDLHLG HTVLLNKMRQ 
FQDLGHQVIF LIGDFTGMIG DPSGKSLTRK PLSKDDVLAN ARTYEEQVFK VLDRSRTEVR
FNSEWFGKMG AADMIRLAGQ HTVARMLERD DFAKRYAAQQ SIAIHEFLYP LVQGYDSVAL
EADVELGGTD QKFNLLMGRG LQEHHGQKPQ VVLTMPLLEG LDGVNKMSKS LGNYIGISEP
AIDIVTKTMK VDDTLMWRWI ELLSFDISQA EAVQLREQVA NGGLNPRVVK LRLARELATR
FHDAAAAEQA VAGWEAAVTG QGDITQLPLQ DVAIPAEGLR IAALLTAAGL TPSNSEANRK
LKERAVKVDG EVVEDGQQVL QPGFEGLLQV GKRTFARVRL VAA