Gene Smal_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0220 
Symbol 
ID6477922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp268376 
End bp269542 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content66% 
IMG OID642729353 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_002026608 
Protein GI194363998 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.581384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCACT CGATGACGAC GGAACTGGAA GAAGCGCAGC AGGCGTACCG CGAGGCGGCG 
CGCGACTTCG CACAGGCCGA ACTGGCGCCG CACGCCGCGC GATGGGATGC GGAGGGCATC
TTTCCGCGCG AGGCGATCGC CAAGGCCGGT GAACTGGGCT TCTGCGGCCT GTACATGGAC
CCGGAAGTGG GCGGCAGCGG CCTGAGCCGA CTGGACGCCG CCGTCGTCAT CGAGGAGCTC
GCCAACGTCG ATCCGTCGAC CGCGGCGTAC ATCAGCATCC ACAACATGGC GTCGTGGATG
GTGTCCAAGT GGGGCCAGCC GGCGCTGCGC GACGCGTGGG GAACCGATCT GTCCTCGGGC
AGCAAGCTGG CCTCGTACTG CCTGACCGAA CCGGGTGCAG GTTCCGATGC GGCCTCGTTG
AAGACCACCG CCGTGCGCGA CGGTGACTTC TATGTGCTGA ACGGCTCCAA GGCCTTCATT
TCCGGCGCCG GTGCCACCGA ACTGCTGGTG GTGATGGCGC GTACCGGTGG TGCCGGTGCC
GGTGGTGTCA GCGCGATCGC GGTGCCGGCC GACCTGCCGG GCATCAGCTT CGGCCGCAAG
GAAGAGAAGA TGGGCTGGAA CAGCCAGCCC ACCCGCGGCA TCACCTTCGA GAACGTCCGC
GTGCCGGTCA GCCACCTTCT GGGAGAGGAA GGCGGCGGCT TCAAGCTGGC GATGAAGGGG
CTCGATGGCG GCCGCATCAA CATCGCCGCC TGCTCGCTGG GCGCTGCGCA GGGGGCGCTG
GATGCCGCAC GCCGCTACAT GGGCGAGCGC CGTCAGTTTG GCAAGACCCT GTCCGAATTC
CAGGCGCTGC AGTTCAAGCT GGCCGACATG GCCATCGAAC TGGTGGCCGC ACGGCAGATG
GTGCACACCG CCGCGCGCAA GCTCGATGCC GGCGCCAGCG ATGCCAACGT GTGGTGCGCG
ATGGCCAAGC GCTTCGCCAC CGATGCTGGC TTCAACATCT GCAACGAAGC ACTGCAGATC
CACGGTGGCT ACGGCTACAT CCGCGAATAC CCGATCGAAC GCCTGCTGCG CGATTCGCGC
GTGCACCAGA TCCTGGAAGG CACCAACGAG ATCATGCGGG TGATCGTTGC CCGTCACCTG
CTCAACACCG AAGAGGAACT GCGATGA
 
Protein sequence
MSHSMTTELE EAQQAYREAA RDFAQAELAP HAARWDAEGI FPREAIAKAG ELGFCGLYMD 
PEVGGSGLSR LDAAVVIEEL ANVDPSTAAY ISIHNMASWM VSKWGQPALR DAWGTDLSSG
SKLASYCLTE PGAGSDAASL KTTAVRDGDF YVLNGSKAFI SGAGATELLV VMARTGGAGA
GGVSAIAVPA DLPGISFGRK EEKMGWNSQP TRGITFENVR VPVSHLLGEE GGGFKLAMKG
LDGGRINIAA CSLGAAQGAL DAARRYMGER RQFGKTLSEF QALQFKLADM AIELVAARQM
VHTAARKLDA GASDANVWCA MAKRFATDAG FNICNEALQI HGGYGYIREY PIERLLRDSR
VHQILEGTNE IMRVIVARHL LNTEEELR