| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0199 |
|---|
| Symbol | |
|---|
| ID | 6477901 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 244082 |
|---|
| End bp | 244690 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 642729332 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_002026587 |
|---|
| Protein GI | 194363977 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.251087 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.943452 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTACA AACGCTCCGC ACTGATGGAA GAACGCCTGG CCGGGGTCCG CGAACGGATC
CTGCTGGCGA CCCGTGAACG GGTCGCCGCC GGCGGATGGC GCAACGCCCC GGTGACCGCT
GTGGCAACCC AGGCGGGGGT GTCCACCGGC CTGATCTACC GGCACTTCCC GTCCAAGGCC
GAGCTGTTCG TGGAGGTGCT CAACGCCGCG GTGGCCCACG AGGTGGCGAT CATGGAGCGC
ATCGCCAGCG GCCCGGAGGT GGCCAGCGAG CGCCTGCGGC TGGCGATCAC CGCCTTCGTC
CGCCGTGCCC TGGCCGGACC GGGGCTGGCG CACGCCTTCA TCGTTGAACC GGTCGATCCG
GAGGTGGAAG CCGAGCGCAT GCGCGGTCGC CGCGCCTTCG GCGACGTCTT CCTGCGGCTG
GTGGAGGAGG GCGTGGCGGC CGGTGAGCTG CCGGCGCAGG ACGCGCACGT GGCCGCCGCC
TGCCTGGTCG GCGCCTTCAC CGAAGCGATG GTCGGCCCCA CCGCGCCCAG CCGGGAAGCA
CACCGCGACG AAGACGCGCT GGTGGACGCG ATCTGCAGCT TCTGCCTGCG CGCGATCGGC
GCTCGGTAA
|
|---|
| Protein sequence | MAYKRSALME ERLAGVRERI LLATRERVAA GGWRNAPVTA VATQAGVSTG LIYRHFPSKA
ELFVEVLNAA VAHEVAIMER IASGPEVASE RLRLAITAFV RRALAGPGLA HAFIVEPVDP
EVEAERMRGR RAFGDVFLRL VEEGVAAGEL PAQDAHVAAA CLVGAFTEAM VGPTAPSREA
HRDEDALVDA ICSFCLRAIG AR
|
|---|
| |