Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0198 |
Symbol | |
ID | 6477900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 242758 |
End bp | 243921 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642729331 |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_002026586 |
Protein GI | 194363976 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.140883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.886093 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGTGC CATCCCTGAA CTTCGACCTT GGCGAAGACA TCGACCTGCT GCGCCAGAGC GTGGCCCATT TTGCCGCCGC CGAGGTCGCA CCGCTGGCCG CCGAAGCCGA CGCCACCAAT CAGTTCCCGC TGGCACTGTG GCCGAAGCTG GGCGAACAGG GCCTGCTCGG GCTCACCGTG GAAGAAGAAT ACGGCGGCAC CGGCATGGGT TACCTGGCCC ACGTGGTGGC GATGGAAGAG ATCTCGCGCG CCTCCGGCGG CATCGGCCTG TCCTACGGTG CGCACTCCAA TCTGTGCGTG AACCAGCTGC GCAAGAACGG CAACGAAGAA CAGAAGCAGC GCTTCCTGCC CGGCCTGTGC AGCGGCGCCC TCGTCGGCGC GCTGGCGATG AGCGAACCGG GTGCCGGTTC GGACGTGGTG TCGATGAAGC TGCGCGCGGA CAAGCGCGGT GACCGCTACG TGCTCAACGG CAACAAGATG TGGATCACCA ACGGCCCGGA CGCCGACGTG CTGGTGGTCT ACGCCAAGAC CGACATGGCC GCCGGCGCCA AGGGCATCAC CGCGTTCCTG GTCGAGAAGG GCATGAAGGG CTTCTCCACC GCGCAGAAGC TGGACAAGCT GGGCATGCGT TCCTCGCCCA CCTGCGAGCT GGTGTTCCAG GATTGCGAAG TACCGGAAGA GAATGTGCTG GGCCAGGTCG GTGGCGGCGT GCGCGTGCTG ATGTCCGGCC TGGACTACGA GCGCGTGGTG CTGTCCGGTG GCCCGCTGGG CCTGATGGCC GCGGCCATGG ACGTGGTCAT GCCCTACGTG CACGAGCGCC ACCAGTTCGG TGAAGCGATC GGCAGCTTCC AGCTGATCCA GGCCAAGATC GCCGACATGT ACGTGGGGCT GGGTGCCTGC CGCGCCTATG TGTACGCCGT GGCGCGTGCC TGCGACCAGG GCCGCACCAC CCGCCAGGAT GCCGCCGGTG CCATTCTGTA CGCCGCCGAG AAGGCCACCT GGCTGACCGG CCAGGCGATC CAGATCCTGG GCGGCAACGG CTACATCAAC GAATATCCGA CCGGCCGCTT GTGGCGCGAC GCCAAGCTGT ATGAAATCGG CGCCGGCACT TCGGAGATCC GCCGCATGCT GATCGGCCGC GAACTGTTCC AGCGCACCCT GTAA
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Protein sequence | MHVPSLNFDL GEDIDLLRQS VAHFAAAEVA PLAAEADATN QFPLALWPKL GEQGLLGLTV EEEYGGTGMG YLAHVVAMEE ISRASGGIGL SYGAHSNLCV NQLRKNGNEE QKQRFLPGLC SGALVGALAM SEPGAGSDVV SMKLRADKRG DRYVLNGNKM WITNGPDADV LVVYAKTDMA AGAKGITAFL VEKGMKGFST AQKLDKLGMR SSPTCELVFQ DCEVPEENVL GQVGGGVRVL MSGLDYERVV LSGGPLGLMA AAMDVVMPYV HERHQFGEAI GSFQLIQAKI ADMYVGLGAC RAYVYAVARA CDQGRTTRQD AAGAILYAAE KATWLTGQAI QILGGNGYIN EYPTGRLWRD AKLYEIGAGT SEIRRMLIGR ELFQRTL
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