Gene Smal_0198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0198 
Symbol 
ID6477900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp242758 
End bp243921 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content66% 
IMG OID642729331 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_002026586 
Protein GI194363976 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.140883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.886093 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGTGC CATCCCTGAA CTTCGACCTT GGCGAAGACA TCGACCTGCT GCGCCAGAGC 
GTGGCCCATT TTGCCGCCGC CGAGGTCGCA CCGCTGGCCG CCGAAGCCGA CGCCACCAAT
CAGTTCCCGC TGGCACTGTG GCCGAAGCTG GGCGAACAGG GCCTGCTCGG GCTCACCGTG
GAAGAAGAAT ACGGCGGCAC CGGCATGGGT TACCTGGCCC ACGTGGTGGC GATGGAAGAG
ATCTCGCGCG CCTCCGGCGG CATCGGCCTG TCCTACGGTG CGCACTCCAA TCTGTGCGTG
AACCAGCTGC GCAAGAACGG CAACGAAGAA CAGAAGCAGC GCTTCCTGCC CGGCCTGTGC
AGCGGCGCCC TCGTCGGCGC GCTGGCGATG AGCGAACCGG GTGCCGGTTC GGACGTGGTG
TCGATGAAGC TGCGCGCGGA CAAGCGCGGT GACCGCTACG TGCTCAACGG CAACAAGATG
TGGATCACCA ACGGCCCGGA CGCCGACGTG CTGGTGGTCT ACGCCAAGAC CGACATGGCC
GCCGGCGCCA AGGGCATCAC CGCGTTCCTG GTCGAGAAGG GCATGAAGGG CTTCTCCACC
GCGCAGAAGC TGGACAAGCT GGGCATGCGT TCCTCGCCCA CCTGCGAGCT GGTGTTCCAG
GATTGCGAAG TACCGGAAGA GAATGTGCTG GGCCAGGTCG GTGGCGGCGT GCGCGTGCTG
ATGTCCGGCC TGGACTACGA GCGCGTGGTG CTGTCCGGTG GCCCGCTGGG CCTGATGGCC
GCGGCCATGG ACGTGGTCAT GCCCTACGTG CACGAGCGCC ACCAGTTCGG TGAAGCGATC
GGCAGCTTCC AGCTGATCCA GGCCAAGATC GCCGACATGT ACGTGGGGCT GGGTGCCTGC
CGCGCCTATG TGTACGCCGT GGCGCGTGCC TGCGACCAGG GCCGCACCAC CCGCCAGGAT
GCCGCCGGTG CCATTCTGTA CGCCGCCGAG AAGGCCACCT GGCTGACCGG CCAGGCGATC
CAGATCCTGG GCGGCAACGG CTACATCAAC GAATATCCGA CCGGCCGCTT GTGGCGCGAC
GCCAAGCTGT ATGAAATCGG CGCCGGCACT TCGGAGATCC GCCGCATGCT GATCGGCCGC
GAACTGTTCC AGCGCACCCT GTAA
 
Protein sequence
MHVPSLNFDL GEDIDLLRQS VAHFAAAEVA PLAAEADATN QFPLALWPKL GEQGLLGLTV 
EEEYGGTGMG YLAHVVAMEE ISRASGGIGL SYGAHSNLCV NQLRKNGNEE QKQRFLPGLC
SGALVGALAM SEPGAGSDVV SMKLRADKRG DRYVLNGNKM WITNGPDADV LVVYAKTDMA
AGAKGITAFL VEKGMKGFST AQKLDKLGMR SSPTCELVFQ DCEVPEENVL GQVGGGVRVL
MSGLDYERVV LSGGPLGLMA AAMDVVMPYV HERHQFGEAI GSFQLIQAKI ADMYVGLGAC
RAYVYAVARA CDQGRTTRQD AAGAILYAAE KATWLTGQAI QILGGNGYIN EYPTGRLWRD
AKLYEIGAGT SEIRRMLIGR ELFQRTL