Gene Smal_0155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0155 
Symbol 
ID6477786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp193846 
End bp194484 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content67% 
IMG OID642729288 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_002026543 
Protein GI194363933 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTGC GCATCATCAT CGCAGACGAC CACCCGGTGG TCCGTATCGG TACCCGTGCC 
GTCATCGAAT CGAGCGGGGT GGGCCGCGTG GTCGGCGAAG CCGACAGCGC GCAGGCGCTG
ATGACCCTGC TCGGCAGCCA ACCCTGCGAC CTGCTGGTCA CCGACTACTC GATGCCGGGC
AGTCCCCAGG CCGACGGCTT CGCCATGATC GGCATGATCC GCCGCCGCCA TCCCGACCTG
CCGGTACTCA TGCTCAGCGT CTCCAACAAC CTGGCGATCC TGCGCATGGT GCTCGACAGC
GGCGTGCTCG GCCTGGTCGA CAAGAGCTCG TCGATGGACG AACTGCCGCA GGCCATCCAG
GCGGTCTATC GCGGCCAGCC CTATATCAGC CGCAGCCTGC GCGAGCGGGT CGAGGCCGCC
GGCAGCTGGC GCATGCGCGA GGGCGACGGC AAGCCACTGT CGCCGCGCGA GGTGGAGGTG
CTGCGGCTGC TGGGCACCGG CATGACCGTG AAGGAAATCT CGCTGCAGCT GCACAAGAGC
GTCAGCACCA TCAGCCGGCA GAAGGGTGAC GCCATGCTCA AACTGGGCCT GAAGGGCGAC
GCCGAGCTGT TCGACTACCT GCGCGACGGC AAGATCTGA
 
Protein sequence
MSLRIIIADD HPVVRIGTRA VIESSGVGRV VGEADSAQAL MTLLGSQPCD LLVTDYSMPG 
SPQADGFAMI GMIRRRHPDL PVLMLSVSNN LAILRMVLDS GVLGLVDKSS SMDELPQAIQ
AVYRGQPYIS RSLRERVEAA GSWRMREGDG KPLSPREVEV LRLLGTGMTV KEISLQLHKS
VSTISRQKGD AMLKLGLKGD AELFDYLRDG KI