Gene Smal_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0115 
Symbol 
ID6477664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp153441 
End bp154199 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content67% 
IMG OID642729248 
ProductN-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 
Protein accessionYP_002026503 
Protein GI194363893 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0625458 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCACA ATCACCGCAT GGGCCCATTT CGCATTCCGC TCCTGCTGCT TGCCGCCGTC 
CTGTTTGCCG GCTGCGCGAG CACCGATGTG CACAACCCGC TCGCCACTTG GGTGCCGTCA
CCCAACCAGA ACGCGCGCAC GCCGGTCATC ATCGTCATCC ACCACACCGA GCAGAAGTCG
GTGCAGCAGA GCCTGCATAC GCTGCGTACC GCCAACAGCG GCGGACGGGT CAGCGCGCAC
TACCTGATCG GCGCCGATGG CCATCGCTAC CAGCTGGTGG CCGATGAACG CCGCGCCTGG
CATGCCGGCG CCGGGCGCTG GGGCACCATC ACCGATCTCA ATTCAGCCTC GATCGGCATC
GAGCTCGACA ACGATGGTCG CAGTCCCTTC AGCCCGGTGC AGATCGAGTC ATTGATCGTG
CTGCTGCGCG ATCTCGCTGA ACGCCTGAAC ATCCCGCCGC GTCAGGTGAT CGGCCATGCC
GACCTCGCGC CGACGCGTAA GCAGGATCCG AGCCGCTTCT TCCCCTGGCA GCAGCTGGCC
GAGGCCGGTT TCGGCGTCTG GCCGCGCGCG GCCGACGGTG CTGCGCCGGA GGGTTTCGAC
GCGTGGAATG CGCTAGCCCG TTTCGGCTAT CCGCTGGACA ACCGCGAAGC CACCATCGCC
GCCTTCCACC GCCGTTTCCG TGGCCGCGAC GACCTGCCGA AGACGCTGGA TGCCGAAGAC
GCCCGTATCC TGCATTCTTT GCTGCTGCAG ACCCCGTAG
 
Protein sequence
MAHNHRMGPF RIPLLLLAAV LFAGCASTDV HNPLATWVPS PNQNARTPVI IVIHHTEQKS 
VQQSLHTLRT ANSGGRVSAH YLIGADGHRY QLVADERRAW HAGAGRWGTI TDLNSASIGI
ELDNDGRSPF SPVQIESLIV LLRDLAERLN IPPRQVIGHA DLAPTRKQDP SRFFPWQQLA
EAGFGVWPRA ADGAAPEGFD AWNALARFGY PLDNREATIA AFHRRFRGRD DLPKTLDAED
ARILHSLLLQ TP