Gene Smal_0103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0103 
Symbol 
ID6477652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp125842 
End bp126633 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content68% 
IMG OID642729236 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_002026491 
Protein GI194363881 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0143451 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCC CCACTCCGGC CCCCCGTGGC GGCGTGGCGC GTGTGTGCCG TTACCTGTAC 
CGCGTACCGC TGCTGTTGGT CCACATCACC GTGTTCCTGC CGCTGATCCT GATCGGCATG
CTGCCGCCGT GGGGCGAGCT GCGCGTGGGC GAGGATACGT TCGGGGCCAA AGTGGTGAAC
TGGTGGCAGG GCGGGTTGAT GTGGATCTTC GGCTTCCGCC TGTCGCAGGT CGGCAGGCCG
CTGCCGGGCG CGGTGCTGTT CGTCGCCAAC CACGTCAGCT GGGTCGACAT CTCCATCCTG
CACAGCCAGC GCATGATGGG CTTCGTTGCC AAGCGCGAGA TCGCCAGCTG GCCGCTGGTC
GGTTGGCTGG CCGCGCGCGG GCAGACCATC TTCCACCAGC GGGGCAACAC CGAATCGCTC
GGTGGGGTGA TGCAGGTGAT GGCCGACCGG TTGCGTGCCG GCAAGGCGGT GGGCGTGTTC
CCGGAAGGGC GCACCCGTGG CGGCCACGAA GTGGGTCCGT TCCATGCCCG CATCTTCCAG
GCCGCAGTTG AAACCGGCGT GCCGGTGCAG CCGGTTGCGC TGGTGTACGG GGCGAAGGGC
GACGCACAGA CCATCGTCGC GTTTGGTCCA GGCGAGAGTT TCGCCGCCAA TTTCCTGCGC
CTGCTCGGTG AGCCGGCGCG GCATACCGAA GTGCATTTCC TGGAGCCGAT CGGTACCCAG
GACCTGGAAG GCCGTCGGCG CATCGCGGAA ACCTCGCGCG CGCGCATCGT GGCGGCCATG
AGCACGCAGT GA
 
Protein sequence
MTSPTPAPRG GVARVCRYLY RVPLLLVHIT VFLPLILIGM LPPWGELRVG EDTFGAKVVN 
WWQGGLMWIF GFRLSQVGRP LPGAVLFVAN HVSWVDISIL HSQRMMGFVA KREIASWPLV
GWLAARGQTI FHQRGNTESL GGVMQVMADR LRAGKAVGVF PEGRTRGGHE VGPFHARIFQ
AAVETGVPVQ PVALVYGAKG DAQTIVAFGP GESFAANFLR LLGEPARHTE VHFLEPIGTQ
DLEGRRRIAE TSRARIVAAM STQ