Gene Smal_0097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0097 
Symbol 
ID6477646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp119856 
End bp121340 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content69% 
IMG OID642729230 
ProductAAA ATPase central domain protein 
Protein accessionYP_002026485 
Protein GI194363875 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0464] ATPases of the AAA+ class 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0174447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00506367 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCGAAC TGCAGGACCT GAGCGCACTG ATCCGCGCCA ATACCCCCCT GATCGTGATC 
GAGACCCAGG ATGAGGGTCG CATCGTCGAA CTGTTCCGGC AGACGCTGAT GCACGTCTGG
CGGGCCCTGC ACCGCTGGTC GATCACCGAG GGCCTGCGCC GCATCGACCT GGACAGCGAG
GACCCGGCGG TCGGGCCGCC CGATGCCAGT GCGGCCCTGC AGATGATCCG CCAGGCCGAC
CAGCGCGGGG TCTACCTGCT GCTCGATTTC CACCCCTACC TGGGCTATGC CAGCCACCAG
CGCGCCCTGC GCGACCTGAT CCAGCGCCGC CACAGCGAGC CGCACGTGCT GGTGCTGATC
GGTGCCAAGG TCGAACTGCC GGCCGAGCTG GAAGCGCTGG CGGTACGCTT CAACCCGCGC
CTGCCCGATG CCAACGCCCT GTTGAAGATG CTGCGCGAGG AGGCCGATGC CTATGCACGC
GAGCATGGTG GTCGTCGGGT TGAAGTCGAC AGCGAAGCGG TCAAGAAGAT CCTGAAGAAC
CTGCAGGGCC TGAGCCTGGT CGATGCCCGG CGCATCGCGC GCCAGCTGAT CTACGCCGAC
GGCGCACTGC GCGACGACGA CCTGCCGCAG CTGGCGCGGC TGAAGTTCGA GCTGCTCAAC
CGCAGCGGCC ACCTGTTCTT CGAACATGAC AGCGCGCGCT TCGGCGACGT GGCCGGAGCG
AACCGGCTCA AGCGCTGGAT CAACCAGCGC CGGGTCGCAT TCATCGCCGG CTCGGCGCCG
GCCGGGCTGG ACCCGCCGCG CGGCATGCTG TTGCTGGGCG TGCAGGGCTG CGGCAAGTCG
ATGCTGGCCA AGGCAACCGC CGCCGGCTTC GGCGTGCCGT TGCTGCGCCT GGACGTAGGC
GCGCTGTACA ACAAGTACCA CGGCGAGACC GAAGCCAACC TGCGTCAGGC ACTGGCCTCA
GCCGAGCAGC TGGCGCCCTG CGTGCTGTGG ATGGACGAGA TCGAAAAGGG CCTGGCCAGC
GGAGGCGAGG ACGGCGGCGT GTCACGCCGC GTGCTCGGTT ACCTGCTGAC CTGGATGGCC
GAACGCAAAG CGCCGGTGTT CATCGTCGCC ACCGCCAACC AGGTACACGA ACTGCCGGCC
GAGCTGCTGC GCAAGGGGCG CTTCGACGAG ATCTTCTTCG TCGACCTGCC CTCGCCGGAG
GTCCGCGTGG AACTGCTGCG GCTGCACCTG GGCCGGCGCC AGCTCAACGC CGATGATTTC
GCACTGCCCG CGCTGGCGGC GGCCGCCAAT GGTTTTTCCG GCGCCGAGAT CGAGCAGGCG
ATCGTGGCCG GCCTGTATGC GGCACATGCC GAGGGCCGGC CGCTGGACAC CGAGCTGCTG
ATGAACGAGA TCCGCGCCAC GCGCCCGCTG TCGGTGCTGA TGGCCGAGCA GGTGGAAGCA
CTGCGGGCGT GGGCGTCGGG GCGGACGGTT TCCGCGGACG ACTGA
 
Protein sequence
MSELQDLSAL IRANTPLIVI ETQDEGRIVE LFRQTLMHVW RALHRWSITE GLRRIDLDSE 
DPAVGPPDAS AALQMIRQAD QRGVYLLLDF HPYLGYASHQ RALRDLIQRR HSEPHVLVLI
GAKVELPAEL EALAVRFNPR LPDANALLKM LREEADAYAR EHGGRRVEVD SEAVKKILKN
LQGLSLVDAR RIARQLIYAD GALRDDDLPQ LARLKFELLN RSGHLFFEHD SARFGDVAGA
NRLKRWINQR RVAFIAGSAP AGLDPPRGML LLGVQGCGKS MLAKATAAGF GVPLLRLDVG
ALYNKYHGET EANLRQALAS AEQLAPCVLW MDEIEKGLAS GGEDGGVSRR VLGYLLTWMA
ERKAPVFIVA TANQVHELPA ELLRKGRFDE IFFVDLPSPE VRVELLRLHL GRRQLNADDF
ALPALAAAAN GFSGAEIEQA IVAGLYAAHA EGRPLDTELL MNEIRATRPL SVLMAEQVEA
LRAWASGRTV SADD