Gene Smal_0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0047 
Symbol 
ID6477596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp55261 
End bp55881 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content67% 
IMG OID642729180 
Productthymidine kinase 
Protein accessionYP_002026435 
Protein GI194363825 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1435] Thymidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.126772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.139333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGC TCTACTTCTA CTACTCGGCG ATGAACGCCG GCAAGACCAC GACCCTGCTG 
CAGAGCGCCC ACAACTACCG CGAGCGCGGC ATGCGGGTGG CGATCCTGAC CCCGCGCCTG
GATGATCGTG CCGGCGCCGG CGTGGTCGCT TCGCGGATCG GCCTGCGTGC CGATGGAATG
GCCTTCGACC GCGATACCGA CCTGCAACGC TGGGTGGAGC ACGATCTGGC GACGAACGGA
CCGATGGGCT GCGTGCTGGT GGACGAGGCG CAGTTCCTCA CCCGTGCCCA GGTCTGGCAG
CTCAGCGAAA TCGTGGATCA GCTGCGGATT CCGGTGCTGT GCTACGGCCT GCGCACCGAC
TTCCGCGGTG AGCTGTTCGA AGGCAGCCAG TACCTGCTGG CCTGGGCCGA CGAGATGCAG
GAGATCAAGA CCATCTGCCA CAGCGGAAAG AAGGCGACGA TGACGGTGCG CGTGGACGAG
CATGGCCGCG CCGTGCAGGA CGGCCCGCAG GTGGAGATCG GCGGCAACGA CCGCTACGTG
TCGGTCAGCC GTGCAGAGTT CAAGAAGATC ACCCGCGGCG AAGGCCGGAT CGATCCGGCG
CAGGCGCCCC TGCCGCTGTA A
 
Protein sequence
MAKLYFYYSA MNAGKTTTLL QSAHNYRERG MRVAILTPRL DDRAGAGVVA SRIGLRADGM 
AFDRDTDLQR WVEHDLATNG PMGCVLVDEA QFLTRAQVWQ LSEIVDQLRI PVLCYGLRTD
FRGELFEGSQ YLLAWADEMQ EIKTICHSGK KATMTVRVDE HGRAVQDGPQ VEIGGNDRYV
SVSRAEFKKI TRGEGRIDPA QAPLPL