Gene Smal_0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0009 
Symbol 
ID6477485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp11606 
End bp12367 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content64% 
IMG OID642729142 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_002026397 
Protein GI194363787 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00486785 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGCAGG AAATTTTCAT CGCCGCTGCT GCCGGGGGCA ATCCGTCCAA CGCCCTGTCG 
CAGATGGGCT TCGAGCATCT GATCCACGAA ATGACCACCA AGCCGGGTGA TTTCGCGGTC
TCCTGGGTCG TGCTGCTGAC CCTGGTCGTG ATGTCGGCCA TGTCCTGGTA CTGGACCGTC
ATCAACATCT TCCGTGCTAC CCGCCTGAAG AGCGCCGCTG ATCGCGTCGT CAGCCTGTTC
TGGGACACCC CGAACGCGCA GGACGCCATC CGTGCGATGG AAGAGCAGCC GGCTTCGGAG
CCGTTCTCGA AGATCGCTCT GGACGCTGCC CAGGCAGCTG CCCACCACCA GCGCGCTGAA
GGCGGCGCCA CCGGTGGCGT GGGTGAGAAC CTGAGCCGTT CGGAGTTCGT CGACCGTGCC
CTGCGTCAGG CCGTGACCCG CGAAAGCAAC AAGCTGCAGT CGGGCATGAC CCTGCTGGCC
ACCGTCGGCG CGACCGCTCC GTTCGTCGGT CTGCTGGGTA CCGTGTGGGG CATCTACGGC
GCGCTGATCA AGATCGGTGC CACCGGCTCC GCTTCGATCG ACGCCGTTGC CGGCCCGGTG
GGTGAAGCGC TGATCATGAC CGCGATCGGT CTGTTCGTCG CGATCCCGGC CGTGTTCGCC
TTCAACTTCT TCAGCAAGAT CAACAGCGCG ACCATCAGCA AGTTCGATAC CTTCGCGCAC
GACCTGCACG ACTTCTTCGC CACCGGTTCG CGCGTCCGCT AA
 
Protein sequence
MLQEIFIAAA AGGNPSNALS QMGFEHLIHE MTTKPGDFAV SWVVLLTLVV MSAMSWYWTV 
INIFRATRLK SAADRVVSLF WDTPNAQDAI RAMEEQPASE PFSKIALDAA QAAAHHQRAE
GGATGGVGEN LSRSEFVDRA LRQAVTRESN KLQSGMTLLA TVGATAPFVG LLGTVWGIYG
ALIKIGATGS ASIDAVAGPV GEALIMTAIG LFVAIPAVFA FNFFSKINSA TISKFDTFAH
DLHDFFATGS RVR