| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0008 |
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| Symbol | |
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| ID | 6477484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 10842 |
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| End bp | 11510 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642729141 |
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| Product | TonB family protein |
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| Protein accession | YP_002026396 |
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| Protein GI | 194363786 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00440942 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACGGAAC AACTAGTCGT TCACCGGTAC GAACAACCCG ATGACAAGGG GCTGAGCTGG
CCTCGCATCG TCGGCATCGC GTTTGTAATT GCCCTGCATC TGGCCGCCTT CATGATGCTC
CTCATCCCCG CCGTGGCTCC CAAGGCCGTG GCTGAGAAGG AGCGCAACGT CATGGTGACC
ATCGTAGACG CGCCGCCGCC GCCACCCCCG CCGCCGCCGC CGCCGCCGCC GACGGATACT
CCGCCGCCGC CGGTGAAGAA TCTGTCGCCG CCGAAGCCGT CGCCGGTTCC GCCGCCGCCG
CAGGCGCCGG TCGTGGACGT GCCGGAGCCG CGCCCGAGCG ACATCGTCAC CCCGCCGTCG
CCGCCGTCGC CGCCGGCCCC GCCGACCTCG ATCGAGGCCA GCGTGGACAT CTCGTCGAAG
GCCATGAATC CGCCGCGCTA CCCGCCGGCA GCCTTCCGCG CTGGTATCCA GGGCGAAGTG
ATCCTGATCA TTGATGTCGA TGCCAGTGGC AACGTCACCA ATGTCACGGT GGAAAAGTCC
AGCCGTAACC GCGACCTGGA CCGTGCTGCG ATGGAAGCTG CCCGGAAGTG GCGTTTCAAC
GCCGCCGAAG CTGGCGGTAA GAAGGCTGCT GGCCGCGTCC GCGTCCCGGT CAACTTTGCA
CTGAACTGA
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| Protein sequence | MTEQLVVHRY EQPDDKGLSW PRIVGIAFVI ALHLAAFMML LIPAVAPKAV AEKERNVMVT
IVDAPPPPPP PPPPPPPTDT PPPPVKNLSP PKPSPVPPPP QAPVVDVPEP RPSDIVTPPS
PPSPPAPPTS IEASVDISSK AMNPPRYPPA AFRAGIQGEV ILIIDVDASG NVTNVTVEKS
SRNRDLDRAA MEAARKWRFN AAEAGGKKAA GRVRVPVNFA LN
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