Gene Slin_7012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_7012 
Symbol 
ID8716280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013733 
Strand
Start bp34717 
End bp35412 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content44% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391754 
Protein GI284005936 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value0.932672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATAT CCTTGACGCT GCTGATCTTA CTTTATTTTG CTGGTTCTTC AATCGCTCAA 
TCTTTGCTAA CAATCAGAGG AAAGACAGAT GATCTACAAA GTAGTCAGGT TTACTTATTC
TTTGTCAACC CAGCCCAATC GGATACTACT TTGGTTGATT CAGCAACCGT CACCCGGCAA
CAATTTAGTT TCAAGAAAAG CCTCCAGGAA CCCAAACAGG CCTTTCTAAG ACTCAGAAAC
CACTCCAAAA AAGTCGCCTT TCTGTGGGAC AATCCTATTG AAGTCAACTT CAGTGATCGC
TCGCCAACTA GCTCATCGGT TACTAACTCG GTGGCCACTA CAGAATGGTA TGACTTTACG
GCCGGAATTG ATTCTACTCA TGAACAACAG GTTGTTGTCT TTGCTAACCA GAAAGCTGCA
CTTCTTCGAC AAAAGCCCCA AAAAGGCGTC ACTTATGATT CAAATAGAGT GATGAGCTTT
GTCAGGACGG GTATAGACCT AATGCAGGTT CGTCGGCGAC AGCTCATCAC GTTTAGAGAA
CGTCATCCTT TATCTTGGGT GAATTTATAC TTGCTTTGCT GGTATCGGTC GGAGTTGGGG
CGTGCCAGTG TTTATCAACT AATGAGACAG TTACCCACAC ATTTGAAGGA GTCGGCCTTA
TATGGTCAAC TTGATTTAGC TTTGCAGGAG ATGTAA
 
Protein sequence
MRISLTLLIL LYFAGSSIAQ SLLTIRGKTD DLQSSQVYLF FVNPAQSDTT LVDSATVTRQ 
QFSFKKSLQE PKQAFLRLRN HSKKVAFLWD NPIEVNFSDR SPTSSSVTNS VATTEWYDFT
AGIDSTHEQQ VVVFANQKAA LLRQKPQKGV TYDSNRVMSF VRTGIDLMQV RRRQLITFRE
RHPLSWVNLY LLCWYRSELG RASVYQLMRQ LPTHLKESAL YGQLDLALQE M