Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6972 |
Symbol | |
ID | 8716235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013732 |
Strand | + |
Start bp | 143650 |
End bp | 144639 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | integrase family protein |
Protein accession | YP_003391715 |
Protein GI | 284005896 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.0164563 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.0336098 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAAGC AAACTGTGTC CTTTTTGCCT ATTACGCAAA ACGATCCATT TTCGTTGGTC CCTTTGCCTC AGTTGAGTGG GGACCAGCAG AAGTATTTGC TGAAAGGGTT ACAGGGAGCG GCTAATACCG AGCGAGCGTA CCGAGCTGAC CTAAATCATT ATACTACCTG GTGCCAGCAG CAGGGGGTGG ACGCTTTGCC CGCTACGTCG GCTGTGTTGG GAGAGTATGT CTCAGCCCTG GGTCCGAAGC GCAAGTGGGC AACTATCGCG CGTCGACTTT CGGCCGTGCG CAAATGGCAT GAATTGCTTG ACCTACCCAG CCCGGTTGAT GATCGCTGGT TAAAGGCGAC ACTGAAAGGT ATCCAGCGGG AACATGGTAC CCATGCTGAG CAGGCACCTG CGTTTGGCGC TAATCAGTTG AAAGGTATTC TGCGTAAACT TGTCACCGAT AGTAAGGGGG TACCCCGGTT TGGACCACTG CGTGATAAAG TCGTTTTGCT GCTGGGTTTT ACGGGGGCCT TTCGCCGGTC GGAGCTGGTG GCGCTCAATG TCGAGCAACT TCATTTTGGT GAGGACGGTG TGGTGATTAC ATACTACGGA AGTAAAACCA ATCAGATAGG ACAGCGAGAA GAAAAGGCCC TTTTTTATAG TCCCGATACT CAGATTTGTC CCGTGCGTAC ATTACAGAAA TGGGTAGCTC TGCTGGAACG AACCAATGGC CCCTTATTAG TAAGAATACG AAAGGGCAAC GAACTAACCG AGGAGCGTTT GACCGATCAG TCGATTGGAG CCATTGTTAA AAAGCATGTG GGTGACCGAT TCTCAGCGCA TTCGATGCGG GCCTCATTTG TGACAACGGC CAAGCTCAAC GGGGCTGATG ATTCAGAAAT CATGCAACAG ACCAAGCACA AAACCAGCGC CATGATCCGA AGGTATACCC GATTAGATTC GATCAAGCAG CATAACGCGG CTAAGAAGTT AGGCTGGTAA
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Protein sequence | MDKQTVSFLP ITQNDPFSLV PLPQLSGDQQ KYLLKGLQGA ANTERAYRAD LNHYTTWCQQ QGVDALPATS AVLGEYVSAL GPKRKWATIA RRLSAVRKWH ELLDLPSPVD DRWLKATLKG IQREHGTHAE QAPAFGANQL KGILRKLVTD SKGVPRFGPL RDKVVLLLGF TGAFRRSELV ALNVEQLHFG EDGVVITYYG SKTNQIGQRE EKALFYSPDT QICPVRTLQK WVALLERTNG PLLVRIRKGN ELTEERLTDQ SIGAIVKKHV GDRFSAHSMR ASFVTTAKLN GADDSEIMQQ TKHKTSAMIR RYTRLDSIKQ HNAAKKLGW
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