| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6970 |
|---|
| Symbol | |
|---|
| ID | 8716233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013732 |
|---|
| Strand | - |
|---|
| Start bp | 141253 |
|---|
| End bp | 142611 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | Cl- channel voltage-gated family protein |
|---|
| Protein accession | YP_003391713 |
|---|
| Protein GI | 284005894 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.06762 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 0.0370361 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAA CCCTTCACTA CGTTCAGGAT CACCTCAGCC TCCTGCGATT TTTAGGAAAA
TGGTTTCTGC TGATTTTGCC GGTGGCCCTG CTTAGCGGTA CGACCAGCGC TTTCTTTTTG
TGGGCGCTCG ACGAAGTTAC CCAGCTTCGC TGGCAACATG GTTGGCTACT CTACGGGCTG
CCATTGATTG GCGTTCTGAT TCTATGGCTC TATCAGAAGG GCGGTAAAAA TGCGGAACGG
GGGAACAACC TACTCATCGA TGAAATTCAT CAACCGGGCG GGGGCGTACC CGGGCGTATG
GCTCCCCTGG TGCTGCTAAC GTCGCTGTTG ACCCACCTTT TTGGCGGCTC AGCCGGTCGG
GAAGGCACCG CCGTTCAGAT GGGGGGTAGT ATCGCTGGGG TGCTGGGCCG ACAGCTCAGG
CTCTCGGAAG CCGATTTGCG CATCCTACTG ATGAGTGGGA TTGCCGCTGG TTTTGGCGCC
ATATTCGGCA CTCCCCTGGC TGGGGCTGTC TTTGCCCTGG AGGTGCTGAC CATTGGCAAG
CTGCGGTATC AGGCCCTGAT TCCCTGTCTG ATGGCCAGTA TTCTTGGCGA CATTACCTGC
GCGGCCTGGG GCATTCACCA CATCCATTAT CAGGTTGCCT TTTCGCATAC GGCCATCCCG
ACCTTTTCGG TGCCGAATGG CTGGCTACTA ACTAAAGTGG CCCTGGCTGG CGCTTTATTT
GGCCTGGCAG CGCTGGTCTT CTCGGAACTG ACGCACGGAC TGCAACGTCT CTATAAGACG
TATTTGCCGT CAACGTATCT CAGACCTATT ATTGGGGGTG TCTTATTAAT TGGTTTAGTG
TGGCTGGTAG GCACCCGCGA CTATCTAGGA TTGGGGGTGG TTAGTCAGCA GCCTAACGGC
ATTTCCATTC TCAATGCGTT TCATTCAGGT GGGATAACTC CCTGGAGTTG GTTCTGGAAA
CTGTTGTTTA CGGCCATCAC CCTCAGCAGC GGCTTTAAAG GGGGCGAGGT AACCCCGCTC
TTTTTCATCG GCGCCTGCCT AGGCAATCTG CTGGCTGGTT GGTTTAATGC GCCCGTCGAT
TTATTCGCAG CCCTGGGCTT CATCGCCATC TTCGCTGGGG CTTCTAATAC TCCGCTTGCC
TCGACGCTGA TGGGCCTGGA GCTGTTTGGC TCCGACAATT TGATCTTTTT TGCGATTGCC
TGCTTTGTGG CCTACTTCTT CAGTGGCCAT ACCAGCATCT ATTCCGCCCA ACGGCTGGGC
GTGACTAAAT CAACGGGCCG AGATATTGTC CACCAGGCTC CCTTGAGCCG CATTCAAACG
TTACGCCGGA GGGCCTTTAC CGGAAATCGG ATCGACTAA
|
|---|
| Protein sequence | MKTTLHYVQD HLSLLRFLGK WFLLILPVAL LSGTTSAFFL WALDEVTQLR WQHGWLLYGL
PLIGVLILWL YQKGGKNAER GNNLLIDEIH QPGGGVPGRM APLVLLTSLL THLFGGSAGR
EGTAVQMGGS IAGVLGRQLR LSEADLRILL MSGIAAGFGA IFGTPLAGAV FALEVLTIGK
LRYQALIPCL MASILGDITC AAWGIHHIHY QVAFSHTAIP TFSVPNGWLL TKVALAGALF
GLAALVFSEL THGLQRLYKT YLPSTYLRPI IGGVLLIGLV WLVGTRDYLG LGVVSQQPNG
ISILNAFHSG GITPWSWFWK LLFTAITLSS GFKGGEVTPL FFIGACLGNL LAGWFNAPVD
LFAALGFIAI FAGASNTPLA STLMGLELFG SDNLIFFAIA CFVAYFFSGH TSIYSAQRLG
VTKSTGRDIV HQAPLSRIQT LRRRAFTGNR ID
|
|---|
| |