Gene Slin_6890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6890 
Symbol 
ID8716156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp59926 
End bp62190 
Gene Length2265 bp 
Protein Length754 aa 
Translation table11 
GC content55% 
IMG OID 
Productcopper-translocating P-type ATPase 
Protein accessionYP_003391636 
Protein GI284005817 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACGC CAACTATCGC CCCGGAGAAG CCCGTTCGAT CAGCGGGAGC TACCACCCGC 
CAAACGTTCC CGGTGCTGGA AATGACCTGC GCGGCCTGCG CCGTTAGCGT CGAGTCGATG
CTTAACAATA CGCCCGGCGT TGCTAAAGCC GCCGTAAATT ATGCTAACCA GTCGGCTACA
GTCGATTATA ATCCAAAGGC CATCACGCCC CAGGGTATGC AGCAGGTGCT ACAGTCGATT
GGCTATGATT TGGTAGTCGA TGTTGAGGAC CCGCAGCAGG TGCAGCAGGA AGCCCAGCAA
CGGCATTATG AGGCTGTTAA GCAGCGTACC CTTTGGGCAG GTATTCTGTC GGTTCCGGTG
GTCATCATCG GTATGTTCTT TATGAATGCG TCCTACGCTA ACTACATTAT GATGGCTCTT
TCAGCTCCAG TAGTGTTCTG GCTGGGTCGG TCGTATTTTA TTAACGCCTG GAAACAGGGG
CGGCACGGCA AGGCCAATAT GGATACGCTT GTAGCCCTGT CAACGGGTAT TGCCTTTTTG
TTCAGCGCGT TCAATACGCT CTACCCGGAG TTCTGGCACA GCCGGGGGCT GCATCCGCAC
GTTTATTTTG AAGCGGCTGC GGTGGTCATT GCGTTTATCT CGCTGGGCAA GCTGCTCGAA
GAGCGGGCCA AGTCGAATAC GTCCTCGGCG TTGAAGAAAC TGATGGGCCT TCAGCCCAAA
ACGGTTCGGA TTATCGAAGA CAATACGGAA CGCAACGTAC CGATTGCGTC GGTCAGGGTG
GGTCAGCTAA TTATGGTGCG GCCCGGTGAG AAAATTCCGG TGGACGGCAG GGTTGAATCC
GGCCAGTCCT ATGTGGATGA AAGTATGATT TCAGGGGAGC CGGTGCCAGT TAACAAGCAG
GCGGGCGAAG CGGTCTTTGC CGGTACGATC AATCAGAAAG GTTCGTTCCG CTTCAGGGCC
GACAAAGTGG GGGGTGATAC CATTCTGGCG CAGATAATCC GCATGGTGCA GGAAGCCCAG
GGCAGCAAAG CTCCGGTGCA GAAATTGGTC GATAAGATTG CCGGTATCTT CGTGCCGGTG
GTCATCGGTA TTGCTCTATT GACGTTCGCG GCCTGGATGC TCCTCGGCGG AGAGAACGCC
TTTACTCATG CACTACTGAC TTCGGTAACG GTGCTGGTCA TTGCCTGTCC CTGTGCATTG
GGGCTGGCGA CACCTACTGC CATTATGGTT GGGGTAGGCA AGGGAGCCGA AAACAACATT
CTCATCAAAG ACGCGGAAAG TCTGGAACTT GGCTACAAAG TCAACGCGGT CATTCTGGAC
AAAACGGGTA CCATTACCGA AGGTAAACCA ACCGTGACGG ATCTGGCCTG GCAGGTCGGC
GACGATGAGG TAGCCCGCCT ATTGCCCATA CTCTATGCGC TGGAAGCTCA GTCGGAACAT
CCCCTGGCTC AGGCCGTTGT TGACCGGTTG AAACAGGCGG ATGTCAGGGA CCTTTCCCTT
GATGGTTTTG AAAGTCTCAC GGGGCTGGGA ATAACGGGCC GCTATAACGG GCAAACCTAC
TGGGTTGGCA ATCGCCGACT GATGGCCGAG CAGGGCCAGT TAGATCAACT AACAAACGTG
AATGGTCTGG TCAGTCGCTG GCAGGATGAA GCGAAAACGG TCGTTTATTT TGCGGATCAA
ACGCGCATTC TGGCGATTCT GGCGATTGCC GACCCCGTGA AGCAAACCTC CCGCGAAGCC
ATTCACACGC TGAGAAAACG CGGTATCGCC GTGTACATGA TGACTGGTGA CAACAAACAA
ACGGCTCAGG CGGTGGCAAA GGCGGTGGGC GTTAACGACT ACCGGGCCGA GGCCCTGCCC
GCCGATAAAG CTGCTTTTGT GAAGGCGCTA CAGGCGCAGG GTAAAGTGGT TGCGATGGTG
GGTGACGGCA TCAACGATTC GCAGGCACTC GCCCAGGCCG ACGTAAGCAT TGCGATGGGA
CGCGGGTCGG ATATTGCCAT GGACGTAGCC AAGATGACAC TTATTACGTC TGACCTGAAC
AGCGTACCTA AAGCGCTGCA CCTGTCGAAG AAAACGGTAC AGGCCATCCG GCAAAACCTG
TTCTGGGCGT TTATCTACAA TGTCATTGGC ATCCCAATTG CCGCCGGGCT GCTGTATCCG
GTTAACGGCT TCCTGCTGAA CCCGATGATT GCCGGGGCAG CCATGGCCCT GAGTTCCGTA
TCCGTCGTAA CCAATAGCCT GCGGTTGCGC TCGGCTAAAC TCTAA
 
Protein sequence
MNTPTIAPEK PVRSAGATTR QTFPVLEMTC AACAVSVESM LNNTPGVAKA AVNYANQSAT 
VDYNPKAITP QGMQQVLQSI GYDLVVDVED PQQVQQEAQQ RHYEAVKQRT LWAGILSVPV
VIIGMFFMNA SYANYIMMAL SAPVVFWLGR SYFINAWKQG RHGKANMDTL VALSTGIAFL
FSAFNTLYPE FWHSRGLHPH VYFEAAAVVI AFISLGKLLE ERAKSNTSSA LKKLMGLQPK
TVRIIEDNTE RNVPIASVRV GQLIMVRPGE KIPVDGRVES GQSYVDESMI SGEPVPVNKQ
AGEAVFAGTI NQKGSFRFRA DKVGGDTILA QIIRMVQEAQ GSKAPVQKLV DKIAGIFVPV
VIGIALLTFA AWMLLGGENA FTHALLTSVT VLVIACPCAL GLATPTAIMV GVGKGAENNI
LIKDAESLEL GYKVNAVILD KTGTITEGKP TVTDLAWQVG DDEVARLLPI LYALEAQSEH
PLAQAVVDRL KQADVRDLSL DGFESLTGLG ITGRYNGQTY WVGNRRLMAE QGQLDQLTNV
NGLVSRWQDE AKTVVYFADQ TRILAILAIA DPVKQTSREA IHTLRKRGIA VYMMTGDNKQ
TAQAVAKAVG VNDYRAEALP ADKAAFVKAL QAQGKVVAMV GDGINDSQAL AQADVSIAMG
RGSDIAMDVA KMTLITSDLN SVPKALHLSK KTVQAIRQNL FWAFIYNVIG IPIAAGLLYP
VNGFLLNPMI AGAAMALSSV SVVTNSLRLR SAKL