Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6890 |
Symbol | |
ID | 8716156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013732 |
Strand | + |
Start bp | 59926 |
End bp | 62190 |
Gene Length | 2265 bp |
Protein Length | 754 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | copper-translocating P-type ATPase |
Protein accession | YP_003391636 |
Protein GI | 284005817 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACGC CAACTATCGC CCCGGAGAAG CCCGTTCGAT CAGCGGGAGC TACCACCCGC CAAACGTTCC CGGTGCTGGA AATGACCTGC GCGGCCTGCG CCGTTAGCGT CGAGTCGATG CTTAACAATA CGCCCGGCGT TGCTAAAGCC GCCGTAAATT ATGCTAACCA GTCGGCTACA GTCGATTATA ATCCAAAGGC CATCACGCCC CAGGGTATGC AGCAGGTGCT ACAGTCGATT GGCTATGATT TGGTAGTCGA TGTTGAGGAC CCGCAGCAGG TGCAGCAGGA AGCCCAGCAA CGGCATTATG AGGCTGTTAA GCAGCGTACC CTTTGGGCAG GTATTCTGTC GGTTCCGGTG GTCATCATCG GTATGTTCTT TATGAATGCG TCCTACGCTA ACTACATTAT GATGGCTCTT TCAGCTCCAG TAGTGTTCTG GCTGGGTCGG TCGTATTTTA TTAACGCCTG GAAACAGGGG CGGCACGGCA AGGCCAATAT GGATACGCTT GTAGCCCTGT CAACGGGTAT TGCCTTTTTG TTCAGCGCGT TCAATACGCT CTACCCGGAG TTCTGGCACA GCCGGGGGCT GCATCCGCAC GTTTATTTTG AAGCGGCTGC GGTGGTCATT GCGTTTATCT CGCTGGGCAA GCTGCTCGAA GAGCGGGCCA AGTCGAATAC GTCCTCGGCG TTGAAGAAAC TGATGGGCCT TCAGCCCAAA ACGGTTCGGA TTATCGAAGA CAATACGGAA CGCAACGTAC CGATTGCGTC GGTCAGGGTG GGTCAGCTAA TTATGGTGCG GCCCGGTGAG AAAATTCCGG TGGACGGCAG GGTTGAATCC GGCCAGTCCT ATGTGGATGA AAGTATGATT TCAGGGGAGC CGGTGCCAGT TAACAAGCAG GCGGGCGAAG CGGTCTTTGC CGGTACGATC AATCAGAAAG GTTCGTTCCG CTTCAGGGCC GACAAAGTGG GGGGTGATAC CATTCTGGCG CAGATAATCC GCATGGTGCA GGAAGCCCAG GGCAGCAAAG CTCCGGTGCA GAAATTGGTC GATAAGATTG CCGGTATCTT CGTGCCGGTG GTCATCGGTA TTGCTCTATT GACGTTCGCG GCCTGGATGC TCCTCGGCGG AGAGAACGCC TTTACTCATG CACTACTGAC TTCGGTAACG GTGCTGGTCA TTGCCTGTCC CTGTGCATTG GGGCTGGCGA CACCTACTGC CATTATGGTT GGGGTAGGCA AGGGAGCCGA AAACAACATT CTCATCAAAG ACGCGGAAAG TCTGGAACTT GGCTACAAAG TCAACGCGGT CATTCTGGAC AAAACGGGTA CCATTACCGA AGGTAAACCA ACCGTGACGG ATCTGGCCTG GCAGGTCGGC GACGATGAGG TAGCCCGCCT ATTGCCCATA CTCTATGCGC TGGAAGCTCA GTCGGAACAT CCCCTGGCTC AGGCCGTTGT TGACCGGTTG AAACAGGCGG ATGTCAGGGA CCTTTCCCTT GATGGTTTTG AAAGTCTCAC GGGGCTGGGA ATAACGGGCC GCTATAACGG GCAAACCTAC TGGGTTGGCA ATCGCCGACT GATGGCCGAG CAGGGCCAGT TAGATCAACT AACAAACGTG AATGGTCTGG TCAGTCGCTG GCAGGATGAA GCGAAAACGG TCGTTTATTT TGCGGATCAA ACGCGCATTC TGGCGATTCT GGCGATTGCC GACCCCGTGA AGCAAACCTC CCGCGAAGCC ATTCACACGC TGAGAAAACG CGGTATCGCC GTGTACATGA TGACTGGTGA CAACAAACAA ACGGCTCAGG CGGTGGCAAA GGCGGTGGGC GTTAACGACT ACCGGGCCGA GGCCCTGCCC GCCGATAAAG CTGCTTTTGT GAAGGCGCTA CAGGCGCAGG GTAAAGTGGT TGCGATGGTG GGTGACGGCA TCAACGATTC GCAGGCACTC GCCCAGGCCG ACGTAAGCAT TGCGATGGGA CGCGGGTCGG ATATTGCCAT GGACGTAGCC AAGATGACAC TTATTACGTC TGACCTGAAC AGCGTACCTA AAGCGCTGCA CCTGTCGAAG AAAACGGTAC AGGCCATCCG GCAAAACCTG TTCTGGGCGT TTATCTACAA TGTCATTGGC ATCCCAATTG CCGCCGGGCT GCTGTATCCG GTTAACGGCT TCCTGCTGAA CCCGATGATT GCCGGGGCAG CCATGGCCCT GAGTTCCGTA TCCGTCGTAA CCAATAGCCT GCGGTTGCGC TCGGCTAAAC TCTAA
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Protein sequence | MNTPTIAPEK PVRSAGATTR QTFPVLEMTC AACAVSVESM LNNTPGVAKA AVNYANQSAT VDYNPKAITP QGMQQVLQSI GYDLVVDVED PQQVQQEAQQ RHYEAVKQRT LWAGILSVPV VIIGMFFMNA SYANYIMMAL SAPVVFWLGR SYFINAWKQG RHGKANMDTL VALSTGIAFL FSAFNTLYPE FWHSRGLHPH VYFEAAAVVI AFISLGKLLE ERAKSNTSSA LKKLMGLQPK TVRIIEDNTE RNVPIASVRV GQLIMVRPGE KIPVDGRVES GQSYVDESMI SGEPVPVNKQ AGEAVFAGTI NQKGSFRFRA DKVGGDTILA QIIRMVQEAQ GSKAPVQKLV DKIAGIFVPV VIGIALLTFA AWMLLGGENA FTHALLTSVT VLVIACPCAL GLATPTAIMV GVGKGAENNI LIKDAESLEL GYKVNAVILD KTGTITEGKP TVTDLAWQVG DDEVARLLPI LYALEAQSEH PLAQAVVDRL KQADVRDLSL DGFESLTGLG ITGRYNGQTY WVGNRRLMAE QGQLDQLTNV NGLVSRWQDE AKTVVYFADQ TRILAILAIA DPVKQTSREA IHTLRKRGIA VYMMTGDNKQ TAQAVAKAVG VNDYRAEALP ADKAAFVKAL QAQGKVVAMV GDGINDSQAL AQADVSIAMG RGSDIAMDVA KMTLITSDLN SVPKALHLSK KTVQAIRQNL FWAFIYNVIG IPIAAGLLYP VNGFLLNPMI AGAAMALSSV SVVTNSLRLR SAKL
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