| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6855 |
|---|
| Symbol | |
|---|
| ID | 8716123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013732 |
|---|
| Strand | + |
|---|
| Start bp | 23235 |
|---|
| End bp | 24263 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003391603 |
|---|
| Protein GI | 284005784 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 0.2188 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 0.575669 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCTG TTAGCAATCG CCCTATAATT ACCTCCGCTT GGGAGGACGT TTGTTACCCC
ATTTACACAA CTCCTTTTAC CAATCTTGTC CCTGACTACG AGTTGGTAGC TACTGATCGC
CAACAACTGG TTATCGGCGA ACCGGCTGGC CGAAAACCCG TCATCTTCGC CGTTCAGAGC
AATGAATACA GCATTATTGA CAATTCAATG CTGCGGGGAG TGGTGGACAG GCTGGTTACC
GATTACAAAT TGGATATACG CTGTACCCCC AACGGTGAAT TCGCCATCAA TGTCATTGTG
CCAGGAGAGA CCTTTAAGAT TGGCAAGCAG ACTGATACGT TAAGCCGCTC CCTTGTCTTT
AACAACTCAT ACAATGGTAA AATGCCCTTC AAGGTACAAG GCACTGTCGT CAATACAACT
ACGGTCGAGA AACATCAGAA AGCGCGGATG CGGATCAGTT ACTATCGCCA GGTTTGCTCC
AATGGGTTAA TGGGCTGGTC AGATGAGTTC ATGAATCTGG ATGATTACCT GAATTGGTTG
TTGAAGGGTA AGCCTAAGAA GTATAAAAAT GCTAAAGAAG TGAAGACCTC ATTCCAGGAG
GCTTACACCT ATCAGGAACG CATTGGGGAG GAATCTGACT TAGTACTGTC CCGTAAGTTT
CACCATAAGG GATTGAACGT AGCTCATTTC GAGCAGTATT TGGAGAAGGT TATCGGACAG
TTTTTGAGTC AGAAAAATGG ACTGACCTTA AAGGTGTATG AACGGATGGC TAAACAGCCG
ATCACTAACG AACGGGCTGA GAAACTGCTT GTTGAAGCCA AACTGCCCAA GATGTTGGCC
CGTCAAGCAA TGGCGCGGAT GGCTGAGGAA GAACGGCTCT TATCAAGCGA ATCAAACTTA
TGGCTGCTCT ATAATGCGGC TAATTTCACC CTGTTCGGCG CACAGGCTTC TTTGTCGATC
AACGACCGCT ACCGACAAGA TGAAGCGATT TTCCACGAAT TGGCAACCTT AGCGTTAACT
GAGAACTGA
|
|---|
| Protein sequence | MASVSNRPII TSAWEDVCYP IYTTPFTNLV PDYELVATDR QQLVIGEPAG RKPVIFAVQS
NEYSIIDNSM LRGVVDRLVT DYKLDIRCTP NGEFAINVIV PGETFKIGKQ TDTLSRSLVF
NNSYNGKMPF KVQGTVVNTT TVEKHQKARM RISYYRQVCS NGLMGWSDEF MNLDDYLNWL
LKGKPKKYKN AKEVKTSFQE AYTYQERIGE ESDLVLSRKF HHKGLNVAHF EQYLEKVIGQ
FLSQKNGLTL KVYERMAKQP ITNERAEKLL VEAKLPKMLA RQAMARMAEE ERLLSSESNL
WLLYNAANFT LFGAQASLSI NDRYRQDEAI FHELATLALT EN
|
|---|
| |