| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6830 |
|---|
| Symbol | |
|---|
| ID | 8716098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013732 |
|---|
| Strand | + |
|---|
| Start bp | 1853 |
|---|
| End bp | 2455 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003391578 |
|---|
| Protein GI | 284005759 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.000000745688 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 0.0705042 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAG AATCTGTTGA CTCCTTCATC GCTTCGTTGA ACTGGGGGAA GGAATTAAAA
TTCGCCGAAG CGATAGCGGT CAAACGTTTA AGTGTCTTTC GTAAGGACGA GTGTAATTTG
AAAGGGAATG AAGCACACGA CATTGCTGTG GGCGTGATTT CTAAGTTTCT GGATGACCCA
GCTTTATCAC TCAAAGAGAG TGATTTAGGT GTACGTAATT TTCGTGCACG AATCAGAGGA
GAGATTAATA ATGCTGTTAA GCTTATCGTA AAGTCAAAAG AAGTTCGTAC TACGGCATCC
TATAGTTATA ATGAAGTGCT GTCAGATGAA GCTTTCTTTG ACTATGTAAT CCAAACGCCC
TCATCAGCAG AAGCTGAGCT AAACAGCAAG CAGGCTGTAA CTGCCTATTT TGACCAAGTT
GGCGAAAAAC TCCTTGCCAA GCCTGACGAA CAGGCTTGGC TTATTCTGGA GGAGTTACGT
GATGGGAAAA AGCCACAAGA AATAGTTGAG GGTAATAACC TAACTATTGA GAAGGTGTAT
AGCGCAATCA AGCGTATTCA TCGTGCAGCC CAGCAGGTGA AAGAGCCAGA ATTATACGTC
TAG
|
|---|
| Protein sequence | MNKESVDSFI ASLNWGKELK FAEAIAVKRL SVFRKDECNL KGNEAHDIAV GVISKFLDDP
ALSLKESDLG VRNFRARIRG EINNAVKLIV KSKEVRTTAS YSYNEVLSDE AFFDYVIQTP
SSAEAELNSK QAVTAYFDQV GEKLLAKPDE QAWLILEELR DGKKPQEIVE GNNLTIEKVY
SAIKRIHRAA QQVKEPELYV
|
|---|
| |