Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6819 |
Symbol | |
ID | 8716079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013731 |
Strand | + |
Start bp | 178306 |
End bp | 178872 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003391568 |
Protein GI | 284005748 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.632991 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCTAC AGGAACTCTA TATTAAAAAC ATGGTATGCG ACCGCTGTAT CTGGGTCGTG CGCACCGAAT TGGAACGATT GGGCTATTCG GTCACGCAGG TCGAGTTGGG GCGGGTTCTA CTGGAAGAGT CTTCTGCTGA TCTGACGACG ATTACCGCCA TGCTGGAGCG GCATGGGTTT GCTTTATTGA CTGATAAAAC GACCCGCGTG GTTAACCAGG TCAAAACCCT GATTATTGAA CTGATCCAAA GCGGGCACAT CGCTGGGTTA CGAACGACGT TGTCTGATTA TTTAGCCGAC CATGTTGGTT TGGACTACGC GCACCTGAGC CATCTGTTTT CCACAACGGA GAATTTGACT ATCGAAAAGT TCTGGATACT TCAGCGGGTC GAGCGGGCCA AAGAATTGTT GAGCTACAAC GAAATTCCCA TCAGCGACAT CGCCAAACGC TTGGGCTATA GCAGTGTGGC TTATCTGACG AATCAATTCA AGCAGGTAAC CGGACTGACA CCCGCTGCTT ACCGGAATCA GCATACAACC GACCGAAACC CACTAGATTG GATATAA
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Protein sequence | MALQELYIKN MVCDRCIWVV RTELERLGYS VTQVELGRVL LEESSADLTT ITAMLERHGF ALLTDKTTRV VNQVKTLIIE LIQSGHIAGL RTTLSDYLAD HVGLDYAHLS HLFSTTENLT IEKFWILQRV ERAKELLSYN EIPISDIAKR LGYSSVAYLT NQFKQVTGLT PAAYRNQHTT DRNPLDWI
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