Gene Slin_6731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6731 
Symbol 
ID8715997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp93535 
End bp94569 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content51% 
IMG OID 
Productprotein of unknown function DUF81 
Protein accessionYP_003391486 
Protein GI284005666 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.379073 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTATGT TTTTATCCGG TTTGCTCTTA TTTAGCTGTG CCCTATTGGC CTTTTCACTG 
AGTGCAGTTT GTGGGGGCGG GGCCGGTCTG TTGTTGTTAC CCCTATTAGG GTCTCTCTTA
CCCGGCGCAC ATGTTCCGGC GGCACTGTCC ATCGGTACGG TTTCCAGTTC CATTTCCCGC
ATCATTGCCT TCTGGCCGCG TATTCGCTGG GATGTGGTGG TATGGTTTGT GCCCCCTGCC
TTACCCGCCG TCTGGATTGG TGCGAAGCTG CTTACTTACA TCAATCCGCT TTATCTGGAG
CTATTGATGG GTTTATTTCT GATGGCTAAT CTACCCTTGA TTTTTCGTTC GGCCAAAGAA
CAGGAGGTTG TTCATCCATT ACCCAAAGGT TATCTGGCTC TGATTGGGCT GGCAGCGGGT
TTTGTTTCGG GTCTAACCGG TGCGGTTGGC TTATTATTCA ATCGGTTCTA TTTGCGCTAC
GGCATGGGCA AGGAGGAAAT CGTGGCAACT CGGGCGGCTA ATGAAGTGAT GCTGCATCTG
GTCAAGCTTG CCTTGTATGC TTCCTTTGGC TTATTGACGG GAAAAGCGCT CACGTTAGGC
GCTGTGATCG CCGTAGCGGC CCTTCTGGCG TCCTATGGCA TGAAATGGCT GCTACCCCAA
TTGAGTGAAG GTCTCTTTCG GCGGGTTGGC TACACGGCTA TGGTCATTTC GGGACTAAGT
TTATTTACCG AAGCGGCTGG CCAGGTGGTC ACGAACGCGC CGATCGATAT TGACTATTCT
CCCGTTGCCA ATGGCATGAG CACGCAACTC CAATGGCGGA ATAAACTGTT TTCGCTGGAG
TTTGAATACG ATGAGGGGTT CGAGTTCGAA CACACCATTC CCTTCAGTGA GCTTCCTCCA
GACAAGCAGG CTGAAGTGAA AAAGCTCAGC CAGGGAGCCG ACCACATGGT ATTGGAAGAA
GTGTTTGGCA TCGATAAACA TGCGTATGAA GTCTATGTCT ATCGGAAGAG GAAGTTGGAA
AAGTTCGATA TATAG
 
Protein sequence
MFMFLSGLLL FSCALLAFSL SAVCGGGAGL LLLPLLGSLL PGAHVPAALS IGTVSSSISR 
IIAFWPRIRW DVVVWFVPPA LPAVWIGAKL LTYINPLYLE LLMGLFLMAN LPLIFRSAKE
QEVVHPLPKG YLALIGLAAG FVSGLTGAVG LLFNRFYLRY GMGKEEIVAT RAANEVMLHL
VKLALYASFG LLTGKALTLG AVIAVAALLA SYGMKWLLPQ LSEGLFRRVG YTAMVISGLS
LFTEAAGQVV TNAPIDIDYS PVANGMSTQL QWRNKLFSLE FEYDEGFEFE HTIPFSELPP
DKQAEVKKLS QGADHMVLEE VFGIDKHAYE VYVYRKRKLE KFDI