Gene Slin_6698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6698 
Symbol 
ID8715964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp59150 
End bp59965 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content47% 
IMG OID 
ProductPeptidase M23 
Protein accessionYP_003391453 
Protein GI284005633 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.145065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTGA AGTGCCTCGG AGTTAGTACT ACTCTCCTGC TACTGTGTGT GAAGACGCTT 
CAGGCGCAGG TCGTTTTCTC TTCTCCTAGT TCATCCTTGG ATACGTCAAC AGCCCAGCAT
AGTCCCGTCG GCTTTCGAGT TAGTTGCTTC GAATCAACGA TAAACTTGCC GAATGAGGCT
TCATCAAAAG TGTTTGGTAC CACTCCGGAC ATAGACTCAC TACTGACGTG CTATGCAGAC
AGTATTTTTA ATGGGTTGAA TGCTCCTAAA CTTTCTTTGG GCAACCGTTC ACACCAGTTA
CAGTTTATTC CTGCCATACC ACCCTTGCGG TTATTGTCCT GGCGGGAATA CCGTGTTACC
AGTAAGTTCG GCTGGCGTAC TCATCCAATT CGCGGAAATA GTAGCTACCA TAACGGCATG
GACATAGCTC AACCAGCTGG CACACCGGTT TATGCAACTG CCTTTGGCGT TGTAAAATGG
GTAAAGTGGG AAGTGGATGG ATTGGGACTA GCCGTTTGTA TAAAGCACCC AACGGGCTAC
GAGTCCATCT ATGGCCATCT TTCTACCCAT GCAGTCCGAG AGAGGAATAT TATCCAACAA
GGAGCGATAA TTGGACAGGT AGGCAGTACG GGGCGCTCTA CGGGACCGCA CTTACACTAT
GCAATACTAT TTCAGGGTAA GCCTGTTGAT CCAGATCGGT ATTGTTTTTT ATGGATCAAG
CAAACCAAAG TCGATTCATC CCAGATCCAA CAGCATCGGT TGATCGGGCC AGGTATATTT
CAAAAAAGTG CCAAACGTAT AATTGAGCGG GATTGA
 
Protein sequence
MNLKCLGVST TLLLLCVKTL QAQVVFSSPS SSLDTSTAQH SPVGFRVSCF ESTINLPNEA 
SSKVFGTTPD IDSLLTCYAD SIFNGLNAPK LSLGNRSHQL QFIPAIPPLR LLSWREYRVT
SKFGWRTHPI RGNSSYHNGM DIAQPAGTPV YATAFGVVKW VKWEVDGLGL AVCIKHPTGY
ESIYGHLSTH AVRERNIIQQ GAIIGQVGST GRSTGPHLHY AILFQGKPVD PDRYCFLWIK
QTKVDSSQIQ QHRLIGPGIF QKSAKRIIER D