Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6678 |
Symbol | |
ID | 8715944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013731 |
Strand | - |
Start bp | 35753 |
End bp | 37171 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003391433 |
Protein GI | 284005613 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000129285 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAAT TTTTATTACC TGCCGGTTTT CTCGGCTCAT GGACAATTTA TAGTATTTAT TACCTGAGAA AAGCTTACCG TACGCCTTCC AATGTAAATC CCTATGTACT CGATTTAATC CCTTCAGTTT TTCCTACTAT TGGTATAATG TGTACAGCCA TAGGCATTGC CTATGGCTTA TCGGACTTTG ATGCCAATGA CATTCAGGGA AGCTTACCTC AGCTATTAGG TGGCTTGAAA TCTGCATTTT TTGCAACTGT TTTGGGGATT GCGGGCTTGA TTATTTTCCA AAAAGTGTTG GCATCCGTAC AGCAACACAT TGACCAGTCG CCAGACCGGC CGCGAAGCTC AAGTGATGAA CTATCAGCCC TAAACTTGAT TAGCACACAG GTAGAAAATT TAGAGCGGAC TTTCCGGACT GAATTGGATA TGGTGAATGT ATCGGTTAAA GAGAATAGCA CAACCTTTAA CCAACAAATT GGAAAGCTAA ACGACTTGAT AACGACTCAA ACCCGTCAAG AAGAGGATCA TTATCAAATT ACATATAGGC AATCAGAATC AATTATAAGG AATTTAACAG AGCTAAAGAA AGCGCAGGAT ACCTATACTA AAGAGCAGCA AACAGGAGTC GATGCCATTG TAAAATCAAT GCTTGGGAAT CAAAAATTGC TTACCGCCAA GTTTGATGAG TTTTCCGAGC TCTTGCGGAA GAACAATACT GAAGCGTTAG TGGAAGTCAT GCGGGCATCG ACAGAGCAGT TCAACGCACA GATGAGTGAG CTTATCGACA AGCTGGTTAA GGAGAACTTC AAGGAATTGA ACGGCAGTGT GCAAATGCTT AACACCTGGC AAAAGGAAAA CAAGGAGCAG GTCGCCAGAC TAAGTGAGCA AGTCAAGACA ATTATTGAGC AGGTCGACAT TGCCACTAAT AATCTGAAAG TGGCATCGAA TGTCCTAACT ACGGTGGCTG ATGTGAATCA GGAATTAGTT TCGGGTGATG GTAAACTGAT GACACTGGTT TCGGAACTCG AAAAAGTCAT GATTAGCGAT GGGACGTTTA CTGCGATCAC CAGCAAAGTT GAGGGTGCTG TAAGCACACT GGTGAAAACT ACCGATGCCT TCGACTTGAC AACTCAAAAG CTAAACGTAT GGGTCCGTAA TCAAATGAAT TTCAATGAGA AAGCAGAAAT CTTAGTGACG CAACTGGAGG AGTTTCGGAA TTTAAATGGA TCTGTTTGGG ACAAGTACCG GGCAGAGATG AGTAAAGCCG TAAATATCGT TTCAACCACA TCAACCGCAT TAAAAAATGA TCTTGAGAAT ATAAATCAAG AGTTTTATGA ACGGCTGAAT GATACCCTGC AAAATCTTGA TGGACTAATC CAACGATTTA TGAGTGGTCA ACCTACTAAT CGACGGTAG
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Protein sequence | MTEFLLPAGF LGSWTIYSIY YLRKAYRTPS NVNPYVLDLI PSVFPTIGIM CTAIGIAYGL SDFDANDIQG SLPQLLGGLK SAFFATVLGI AGLIIFQKVL ASVQQHIDQS PDRPRSSSDE LSALNLISTQ VENLERTFRT ELDMVNVSVK ENSTTFNQQI GKLNDLITTQ TRQEEDHYQI TYRQSESIIR NLTELKKAQD TYTKEQQTGV DAIVKSMLGN QKLLTAKFDE FSELLRKNNT EALVEVMRAS TEQFNAQMSE LIDKLVKENF KELNGSVQML NTWQKENKEQ VARLSEQVKT IIEQVDIATN NLKVASNVLT TVADVNQELV SGDGKLMTLV SELEKVMISD GTFTAITSKV EGAVSTLVKT TDAFDLTTQK LNVWVRNQMN FNEKAEILVT QLEEFRNLNG SVWDKYRAEM SKAVNIVSTT STALKNDLEN INQEFYERLN DTLQNLDGLI QRFMSGQPTN RR
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