Gene Slin_6650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6650 
Symbol 
ID8715917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp10817 
End bp11617 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content58% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391406 
Protein GI284005586 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.237631 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.336128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCAAC TAAAAGGGCA AACCTGGTTG TTGATGCTGG CCGGGCTGGT GTTTGCGGTA 
GCCGTTTTCT ACGCATTCCG ACAGCCCAAC AGCAAGCCTA TAAACGTCAA CTGGCAGAGT
CAGGTGAGTC CGGGTCACCT CTCGGCGGCT CACGCGCAAT TTGCCACCAA CTGTGCCGCC
TGCCACACGC CGGTGATGGG CATTAACGAA GCGAAATGTA TTAGTTGCCA CGCCGACAAC
AAAGAATTGC TGGGTCGGCA GCCAACCGCC TTTCACGCGA CCATCGGCAA CTGCGTGTCC
TGCCACATGG AGCATCTGGG GGTGAACGCA AACCTGCGCG TGATGAACCA CGAAGCCTTA
GCCAAAATCG GTGGGAAGTT GTTTGCGGGC GGAACGAAGA TGCCTAACCA GGCCGCTAAA
GCCCAGTTGC CCGCCAATCA CCCGCTACTG TCATCCCTCG AAGCCAGCCT GAACTGCGCT
AGTTGCCATA ACCCCAAAGC CCCGCCCCAT TTCGGTTTGT TCGGCCCGGA CTGCGCGTCG
TGCCATGCCG CTACGGAGTG GACGATTTCG GCGTTTCAGC ATCCATCCCC CCGCTCAACG
GAGTGCGTTC AGTGCCATCA GGCCCCGCCA AGCCACTATA TGATGCACTT CGAGATGGTT
GATAAAACGG TGGTGGCCGG GGGGAGCAGC GGGCAGGTTG AGGGGTGCTG CGGAGGGGTT
GACGTGACAC AGTGCTACAA ATGCCACCAA ACGACCTTTT GGAACGACAT CAAAGGCGTG
GGTTTTTACA AGCATCATTG A
 
Protein sequence
MVQLKGQTWL LMLAGLVFAV AVFYAFRQPN SKPINVNWQS QVSPGHLSAA HAQFATNCAA 
CHTPVMGINE AKCISCHADN KELLGRQPTA FHATIGNCVS CHMEHLGVNA NLRVMNHEAL
AKIGGKLFAG GTKMPNQAAK AQLPANHPLL SSLEASLNCA SCHNPKAPPH FGLFGPDCAS
CHAATEWTIS AFQHPSPRST ECVQCHQAPP SHYMMHFEMV DKTVVAGGSS GQVEGCCGGV
DVTQCYKCHQ TTFWNDIKGV GFYKHH