Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6650 |
Symbol | |
ID | 8715917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013731 |
Strand | - |
Start bp | 10817 |
End bp | 11617 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003391406 |
Protein GI | 284005586 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.237631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.336128 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTCAAC TAAAAGGGCA AACCTGGTTG TTGATGCTGG CCGGGCTGGT GTTTGCGGTA GCCGTTTTCT ACGCATTCCG ACAGCCCAAC AGCAAGCCTA TAAACGTCAA CTGGCAGAGT CAGGTGAGTC CGGGTCACCT CTCGGCGGCT CACGCGCAAT TTGCCACCAA CTGTGCCGCC TGCCACACGC CGGTGATGGG CATTAACGAA GCGAAATGTA TTAGTTGCCA CGCCGACAAC AAAGAATTGC TGGGTCGGCA GCCAACCGCC TTTCACGCGA CCATCGGCAA CTGCGTGTCC TGCCACATGG AGCATCTGGG GGTGAACGCA AACCTGCGCG TGATGAACCA CGAAGCCTTA GCCAAAATCG GTGGGAAGTT GTTTGCGGGC GGAACGAAGA TGCCTAACCA GGCCGCTAAA GCCCAGTTGC CCGCCAATCA CCCGCTACTG TCATCCCTCG AAGCCAGCCT GAACTGCGCT AGTTGCCATA ACCCCAAAGC CCCGCCCCAT TTCGGTTTGT TCGGCCCGGA CTGCGCGTCG TGCCATGCCG CTACGGAGTG GACGATTTCG GCGTTTCAGC ATCCATCCCC CCGCTCAACG GAGTGCGTTC AGTGCCATCA GGCCCCGCCA AGCCACTATA TGATGCACTT CGAGATGGTT GATAAAACGG TGGTGGCCGG GGGGAGCAGC GGGCAGGTTG AGGGGTGCTG CGGAGGGGTT GACGTGACAC AGTGCTACAA ATGCCACCAA ACGACCTTTT GGAACGACAT CAAAGGCGTG GGTTTTTACA AGCATCATTG A
|
Protein sequence | MVQLKGQTWL LMLAGLVFAV AVFYAFRQPN SKPINVNWQS QVSPGHLSAA HAQFATNCAA CHTPVMGINE AKCISCHADN KELLGRQPTA FHATIGNCVS CHMEHLGVNA NLRVMNHEAL AKIGGKLFAG GTKMPNQAAK AQLPANHPLL SSLEASLNCA SCHNPKAPPH FGLFGPDCAS CHAATEWTIS AFQHPSPRST ECVQCHQAPP SHYMMHFEMV DKTVVAGGSS GQVEGCCGGV DVTQCYKCHQ TTFWNDIKGV GFYKHH
|
| |