| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6604 |
|---|
| Symbol | |
|---|
| ID | 8730390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 8021372 |
|---|
| End bp | 8022241 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | glycerophosphoryl diester phosphodiesterase |
|---|
| Protein accession | YP_003391360 |
|---|
| Protein GI | 284041430 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.808367 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAG TGCTAAAACG CCTGATGCCG GGATTACTGC TCGGGTGGTT CATTGGATTT
ACCCCCGCCT GGAGCCAGTC GCCGGGAATG GACTCGATCC CCTATTTCCG AAACAGTCTG
GCGACCCACC ACAACATGGG CGTTTCGGCG CACCGGGGAG CATCTCCGGC AGCCCCAGAA
AACACACTGG CCACGTTCAG GCTGGCGCTG CAAATGCAGG TCGATTACAT CGAGATTGAT
GTTCGAACGA CGAAAGACGG TAAGCTGGTG ATTTTGCACG ACGGCACGCT CAACCGCACC
ACCAACGGAA CCGGCCCGGT CAGCGAACAG ACACTGGCTG ACCTGAAAAA ACTATCGGCC
GCCAACGGTA TGAATGATGC ATTTAAAGCC GAACAGATTC CAACCCTTGA CGAAGTTTGC
CAGTTGCTGG CCGACTGGAA TGCCCGGCAC CCGGCAAAAA CCAACCTGTA TGTCGATTGC
AAAGACGTAG CCCCGGAGCC GCTGGTGGCC GTCCTGACGC GCTATGGGTT ACTTACCAAT
GCCGTTTTTT ATGGGTCCGA CGAAAAATTG CTGGCACTGA AAAACGCAGC ACCGAGAGCC
AGGCTTATGC CTGGTCTGAA ACGGGCCGAC CAGATGGCGG CTAAAATCGC CACTCTGCAT
CCGTATGCGT TCGACGTAAG CTGGCCCGCC CTGAGCGAAG CCTTGGCTGG CCAAATTCAT
CAGCAAAACA TAAAGGTATT TTCCGATCTG CTGGACGGAT TTGATACTCC CGTTGAGTAC
CAAAAAGCAG TTCACTTCGG CGTAGACGTC ATCCAAACGG ATCAGGTGCT TCAGGTCTAT
AGAACTCTGG CGGCTAAACC AACCCACTAA
|
|---|
| Protein sequence | MKRVLKRLMP GLLLGWFIGF TPAWSQSPGM DSIPYFRNSL ATHHNMGVSA HRGASPAAPE
NTLATFRLAL QMQVDYIEID VRTTKDGKLV ILHDGTLNRT TNGTGPVSEQ TLADLKKLSA
ANGMNDAFKA EQIPTLDEVC QLLADWNARH PAKTNLYVDC KDVAPEPLVA VLTRYGLLTN
AVFYGSDEKL LALKNAAPRA RLMPGLKRAD QMAAKIATLH PYAFDVSWPA LSEALAGQIH
QQNIKVFSDL LDGFDTPVEY QKAVHFGVDV IQTDQVLQVY RTLAAKPTH
|
|---|
| |