Gene Slin_6575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6575 
Symbol 
ID8730361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7983333 
End bp7984469 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content56% 
IMG OID 
Productthiazole biosynthesis protein ThiH 
Protein accessionYP_003391331 
Protein GI284041401 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACAA CAACCTGGTT TGACGCCTAC GACTGGAACG CCGTTCAGCA GGATATTCAG 
GCCGTTACTC CGCAACAGGT GGAACGGGCA CTGGGCAATA CCCGCCGGAC GCTCGGTGAT
TTTAAAGCAC TGATCTCACC GGCGGCTCAG GCGTATCTGG AACCGATGGC CCAGCTTAGC
CACCAGCTGA CGCAGAAACG GTTCGGCAAG ACGATCCAGC TGTATGCGCC CCTGTATCTG
TCCAACGAAT GTCAGAACAT CTGCACCTAC TGCGCCTTTA GTCTCGACAA TAAAATCGTC
CGCAAAACCC TTACCGATGC TGAAATAGGG CGGGAGGTCA ATGCCCTGAA GCAACTGGGC
TATGAGCATG TACTGCTGGT GACCGGTGAG GCAAATCAGA CTGTTGGGGT GCCGTACCTT
CGAAACGCTA TTCGTCTGCT ACAGCCGCAC TTCGCCCATA TTTCCATGGA GGTGCAGCCC
CTCGACCAGC CCGAGTACGA AGAACTAATC GCCGAAGGGC TCAACACGGT GCTGGTGTAT
CAGGAAACGT ACCATCGGGA AACGTATAAA AACCATCACC CGAAGGGTAA GAAATCGAAT
TTCGCCTACC GGCTCGATAC TCCCGACCGG CTGGGAAGGG CGGGCGTGCA TAAGATGGGC
CTGGGTGCGT TGCTCGGGCT GGAAGACTGG CGTACGGATA GCTTTTTCAC GGCGGCTCAT
CTGCACTACC TCGAACGCAA GTACTGGCAG ACCAAATACA GCATCTCCTT CCCGCGTCTC
CGCCCCATCG ACTTATTGCA GGATGACACC ATCACCTCCA AATCGTTCGA GCGGTGCATG
TCTGATCGGG ATCTGGTCCA ACTGATCTGC GCTTACCGGC TGTTCAACGA GGAGGTCGAA
CTCTCCCTTT CAACCCGCGA AACGCCCCGC TTCCGCGATC ATGTTCTCAA GTTGGGTGTC
ACCAGCCTGA GTGCGGGGTC CAAAACCAAT CCAGGTGGCT ATGCCGTTGA GCCGCAGTCG
CTGGAGCAGT TCACCATTTC GGACGAACGG AGCCCCGCCG AGATGGTCGA CGTTATTCGG
AGGCAGGGAT ACCAGCCGGT TTGGAAAGAC TGGGATAAAA CGCTCGCTGC CTTATGA
 
Protein sequence
MSTTTWFDAY DWNAVQQDIQ AVTPQQVERA LGNTRRTLGD FKALISPAAQ AYLEPMAQLS 
HQLTQKRFGK TIQLYAPLYL SNECQNICTY CAFSLDNKIV RKTLTDAEIG REVNALKQLG
YEHVLLVTGE ANQTVGVPYL RNAIRLLQPH FAHISMEVQP LDQPEYEELI AEGLNTVLVY
QETYHRETYK NHHPKGKKSN FAYRLDTPDR LGRAGVHKMG LGALLGLEDW RTDSFFTAAH
LHYLERKYWQ TKYSISFPRL RPIDLLQDDT ITSKSFERCM SDRDLVQLIC AYRLFNEEVE
LSLSTRETPR FRDHVLKLGV TSLSAGSKTN PGGYAVEPQS LEQFTISDER SPAEMVDVIR
RQGYQPVWKD WDKTLAAL