| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6562 |
|---|
| Symbol | |
|---|
| ID | 8730348 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 7963866 |
|---|
| End bp | 7964909 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | ribonuclease BN |
|---|
| Protein accession | YP_003391318 |
|---|
| Protein GI | 284041388 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.357212 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACGC TCATGACAAA TATGATGACA GGGTTTTACA AGCGACTCTT TGCAGACTCA
ATTCCCCAGC CTGCTGCGCC CGCTGTGGCA CCGAAAGGCT TTTTTGCCAA TGCCTGGATC
GTGCTACGCG ATTCGTTTAA CGGCTTTCTG GATGACCGTT GCCTGAAGCT GAGTGCAGCA
CTGGCTTATT ACACCATTTT TTCGCTGGCT CCCCTGCTGG TGCTGGTCAT GTCGCTGGCT
AGTATTTTTC TGGGTGAAGA GGCTATTCAG GGGCAGATTT TCGGGCAGAT CAACGGCCTG
GTGGGGAATG ATGCCGCCAA GCAAATTCAG GAGATGATCA AGAATGTAGG CCTTTCGGGC
AAGACCAACA CGGCTCTGAT CATTGGAATA GGCACTTTGC TGCTTGGTGC TACCAGCCTT
TTCGTCGAGA TTCAGGACTC CGTCAATCTG ATCTGGCGAG TCAAAGCGAA ACCTAAACAA
GGCTGGCTCA AACTGATAAA AGATCGGTTG CTATCGTCTT CCCTCATCGT CAGTTTAGGT
TTCCTGCTTC TGGTTTCGCT GGTCGTCAAT GGTATTGTGC TGGCATTAAG CGATCAGCTA
ACCCGTTTTA TGCCTGGCCT GGGTGTTTAT ATAATCAGTG CGATTAATTT CCTGGTGAGC
ACGGCCGTGG TTACCATACT GTTCGGGGTT ATTTTCAAAG TTCTGCCCGA CGCTAAAATT
GCCTGGAAAG ATGTGCGTTG GGGAGCCATT TTTACGGCTC TCCTATTCAT GCTGGGGCGG
TATTTAATTG GGCTTTACAT CGACACTACC GCCACCAGTT CGGCCTACGG AGCCGCCGGA
TCGCTGATCG TACTCCTGAC CTGGATTTAC TATACGGCCG CCATTCTGTA CTTCGGGGCC
GAGTTCACCC AGGCATACGC AAACCATTTT GGTATTAAGA TTGAGCCATC GGAAAACGCC
GTGTACGTCG AGCAAACGGA ACGGGAGCAC GAAACGGGAG CCATACCAAC CCAGCAAAAA
GTAGAACAGA GCAGGCAGCG CTGA
|
|---|
| Protein sequence | MATLMTNMMT GFYKRLFADS IPQPAAPAVA PKGFFANAWI VLRDSFNGFL DDRCLKLSAA
LAYYTIFSLA PLLVLVMSLA SIFLGEEAIQ GQIFGQINGL VGNDAAKQIQ EMIKNVGLSG
KTNTALIIGI GTLLLGATSL FVEIQDSVNL IWRVKAKPKQ GWLKLIKDRL LSSSLIVSLG
FLLLVSLVVN GIVLALSDQL TRFMPGLGVY IISAINFLVS TAVVTILFGV IFKVLPDAKI
AWKDVRWGAI FTALLFMLGR YLIGLYIDTT ATSSAYGAAG SLIVLLTWIY YTAAILYFGA
EFTQAYANHF GIKIEPSENA VYVEQTEREH ETGAIPTQQK VEQSRQR
|
|---|
| |