Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6529 |
Symbol | |
ID | 8730315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 7921930 |
End bp | 7925157 |
Gene Length | 3228 bp |
Protein Length | 1075 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | TonB-dependent receptor plug |
Protein accession | YP_003391285 |
Protein GI | 284041355 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAAAC ATATGCTTTC AGGCGCGTTC GTCCTGAGTA GCTGGCTTAC TGTCCACGCT CAGGATCGAA CCGCACCCAG ATTAGCCCAG TTGGACAATC CGGCTGTTCT GGCCACAAAC AGGGGTGCGA AAACGCGCAT CGACATCCAG TCGGATGTGA AAGCCCTGAT AAAAGGGACG GTGTCCGACG AAAAAGGGAA TACGTTGCCC GGTGCTACGG TATCGGTGAA AGGGACACAG TTAGGAACGA CGACGGACGT GAATGGAGCC TTCTCGATCA ATATGCCCGC TGGTGCTAAA GTACTCGTCA TCTCGTTTAT CGGGATGAAA ACGCAGGAGG TTGAAGTGGG TAGCCGCACA ACGCTCAACA TCACTCTCCA GACCGGCGAT CAGTCGCTGG ACGAAGTGGT CGTTATTGGG TACGGTACGG CCAAACGGTC GGATGTGACC TCGTCCATCA CAACGGTAAA AGCGGCCGAT CTGAAAGATA TTCCGGCGGC TGGTATTGAC CAGCTTCTAC AAGGTAAAGC GGCCGGTGTA ACGGTAACCA GCAACGGTGG TCAGCCGGGC GGTGGCGTAT CGGTAAAAGT GCGCGGAGTT ACGTCCATCA ACAGCAATGA CCCGCTGTTC GTGATCGACG GCGTACCGTT CGTGGGCGGT AACACCTCGA ACAGCACGGG CTATGCCGGT CTGGGCGGTG GCGATGGCCA AACCGGAAAC AGCGTAATGG CCATGCTGAA CCCTAACGAT ATTGAGTCCA TCGACGTCCT GAAAGATGCG TCGGCGCAGG CTATCTACGG GTCACAGGCG GCTAACGGCG TTATTATGGT GACCACCAAG AAAGGTAAGC AGGGCGAAGG CAAGATCAAC TACGAAATGT ACACCGGCGT TTCGGAAGTG GCTCGTCGGC TGAACCTGAT GAAGCTGCCC GATTTTGCCC GATACCAGAA CGAAGTGCTT CCAATCATTG GCAACCCGGT TGCCGATGAG TTCAAAAATC CGGATCTGCT CGGGCCCGGT ACCGACTGGC AGGAAGCGAT GTTCCAGCAG GGTAAAATCA ACAACCACCA GTTGAGCTTC TCTGGTGGAC GGGACAAGAC GACCTACTAC CTGTCGCTGA ACTACTTCGA CAACAAAGGG ATTCTGCTGG GTTCGGATTT CAAACGGTAT TCGTCGCGTT TCAGCCTCGA TACACAGCTG AAGAGCTGGG TTAAAGTAGG TCTGAGTGCC AACGTATCGC GCAGTATCCA GAACGTATCC CTGGCCGATG CGGCCGAAGG AACCATCTGG TGGGGTGCGT CGACTAGCCC GCTGATTCCC GTAAAAAACC TCGATGGTAC GTGGGGTGGT GGCCAGACGG TGGGTGGTGT GCAATATAAC AACGCCAACC TGGTCGGTAA CAGCCAGTTC CGGGGCAATA CCAAAACATC GAACAACGTG TTTGGTAGCT TGTACGCAGA ATTTCAACTG CTGAAAGGCC TATCGTTGCG CAATGAACTG TCGTACTCGC TGGGGCAGGA TAACAACATC GCGTTCCAGA AAGCCGGTAA CGTGGGTGGT ACGTCGTTCC GTAGCAAACT GATCGACTCC CGGTCGGATA GCTACTACTA TTCGATTACC AACTACCTGA ATTACAACCT GTATTTCAAG AAACACGGTA TTCAGGCCAC GCTGGGCCAT CAGGCGCAGC ACTCGTATTA CCAGTCGATT TCGGGTACGA AAGTGGATTT GCAGGCCAAC ATCTTCGACT TGAACACGGG TAGCTCGGAC CAGACGACCT GGGGCTTGAG TGGTGGTAAA GGCCAGTGGG CTATGGAGTC GTATTTCGCC CGGGCTAACT ACACGTATGA TGATCGCTAC TCGATTTCGG CCAGTTTCCG CGCCGATGGT TCGTCGAACT TCGGTCCTAA CAACCGCTGG GGGTATTTCC CCGGTGTATC GGCGGGCTGG ACGATCTCGA ACGAGAAGTT CATGAAAGGC AACATCTCGA AAGTGTTGAG CTATGCTAAA GCACGTCTGG GCTACGGTAT CGTAGGTAAC CAGAACTTCC CCGGTGGCGC ACCGAACCCA GCCTATGTGG GTGCGGTTCA GTTCTTCTCC GGTCCGGTGG GCTTCGGCTC ATCGAACATG ATCAACGGGA TACCAAACCC GAACCTGAAA TGGGAATCGG TGAAAACGGC CAACGCCGGT GTTGACCTCG GCTTCTTCAA CGGCCGCATC GACGCTACCA TCGATGTCTA CAAGAAAGTA ACCTCCGACA TGATCATCTT CCTGACCGGC CCGAACCTGA TCGGGGTAGG CGACCAGTGG GATGATCTGA AAGCACCGCT GGGCAACGCG GGTCAGATGA CCAACACGGG TATCGACATT GGCCTGACCA CGACCAACAT CAAAAAGGGT AACTTCAGCT GGAAGAGCAA CGTTGTGTTC ACGCAGTTTA CGAACCGTTA CGACCGGGCC GCCAGTGCTG CTTCGGCTCT CGATGGTAAG GTGTACTACA ACAACTACCT GATTACGCAC ACCACGCCAG GCACGCCTGT TGGCTCGTTC TGGGGATTGG TAACGGACGG ATTGTTCCGT ACGCAGGCCG ATCTGGACGC CAGTCTGCCG CAGTTCGGCT ACAAAGTGAA CCAGACAGAA ACCTGGTTGG GCGACATCCG GTACAAAGAC ATCAACGGCG ACAAAAAGAT CGACGCGCAG GACCTGACAT TCATTGGTAG CCCGCTGCCG AAGTTCACCT GGGGCTTCAC CAACACGCTG AACTACGGGG ATTTTGATTT CACGCTGTTC TTTCAGGGAA GCCAGGGCGC CAAAGCTTAC AACTTCCTGC GCTGGCAGTT GGAAGGGCTG AACAACGCTT ATACTAACCA ACTGAATACG GTAACGGACC GGTACACCGA AAAGAATCCG AATGGTGCGC TGCCACGCTT CACGAATACC AACAAGAACA ACACGGCCAT GTCGGACCGG TATGTGGAGG ACGCATCGTA CGCCCGGATT CAGAACATCA CGCTGGGTTA CCGGCTGCCA AGAACGCTGC TGAGTAAAGT GAAGATTACT AACCTGCGGG TATACGGGTC GATTCAGAAC CTGAAGACGT TCACCAACTA CTCGGGATAC GACCCAGAAA TCGGGGCCTT CAATAACAGC ATCAAACTCA TGAACGTGGA CACGGGCCAC TACCCGAACC CACGGACGTT CACCGTAGGC GCAAATCTGC AATTCTAA
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Protein sequence | MIKHMLSGAF VLSSWLTVHA QDRTAPRLAQ LDNPAVLATN RGAKTRIDIQ SDVKALIKGT VSDEKGNTLP GATVSVKGTQ LGTTTDVNGA FSINMPAGAK VLVISFIGMK TQEVEVGSRT TLNITLQTGD QSLDEVVVIG YGTAKRSDVT SSITTVKAAD LKDIPAAGID QLLQGKAAGV TVTSNGGQPG GGVSVKVRGV TSINSNDPLF VIDGVPFVGG NTSNSTGYAG LGGGDGQTGN SVMAMLNPND IESIDVLKDA SAQAIYGSQA ANGVIMVTTK KGKQGEGKIN YEMYTGVSEV ARRLNLMKLP DFARYQNEVL PIIGNPVADE FKNPDLLGPG TDWQEAMFQQ GKINNHQLSF SGGRDKTTYY LSLNYFDNKG ILLGSDFKRY SSRFSLDTQL KSWVKVGLSA NVSRSIQNVS LADAAEGTIW WGASTSPLIP VKNLDGTWGG GQTVGGVQYN NANLVGNSQF RGNTKTSNNV FGSLYAEFQL LKGLSLRNEL SYSLGQDNNI AFQKAGNVGG TSFRSKLIDS RSDSYYYSIT NYLNYNLYFK KHGIQATLGH QAQHSYYQSI SGTKVDLQAN IFDLNTGSSD QTTWGLSGGK GQWAMESYFA RANYTYDDRY SISASFRADG SSNFGPNNRW GYFPGVSAGW TISNEKFMKG NISKVLSYAK ARLGYGIVGN QNFPGGAPNP AYVGAVQFFS GPVGFGSSNM INGIPNPNLK WESVKTANAG VDLGFFNGRI DATIDVYKKV TSDMIIFLTG PNLIGVGDQW DDLKAPLGNA GQMTNTGIDI GLTTTNIKKG NFSWKSNVVF TQFTNRYDRA ASAASALDGK VYYNNYLITH TTPGTPVGSF WGLVTDGLFR TQADLDASLP QFGYKVNQTE TWLGDIRYKD INGDKKIDAQ DLTFIGSPLP KFTWGFTNTL NYGDFDFTLF FQGSQGAKAY NFLRWQLEGL NNAYTNQLNT VTDRYTEKNP NGALPRFTNT NKNNTAMSDR YVEDASYARI QNITLGYRLP RTLLSKVKIT NLRVYGSIQN LKTFTNYSGY DPEIGAFNNS IKLMNVDTGH YPNPRTFTVG ANLQF
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