Gene Slin_6518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6518 
Symbol 
ID8730304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7909060 
End bp7909989 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391274 
Protein GI284041344 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.322145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACATG CCCTTAGCCC TGATTGCCTT CCCAATGCCC GAGGCCCTAC GCTCATTACC 
CCTTGCCCCT TGGCCCATTC CTTCGTACTT TTGTTACTTT ATCACCTATC GGGCAAGCCC
TTGAAAGAAT ACGGCAGTAG TATCCAAAAG CTCGTTGACA ATATGGTCAA CATTGACGAT
CGCTCAACCC GAACTCGGTA TGCACATATC CTGATTGAGT TGATGCGACA AATCCATCCC
AATATGAAGG ATGGTCAGGA CTACTACAAT AAGTTGTGGG ACGACCTGTA CATCATGTCT
AATTTTACGC TGGATGTGGA TAGCCCCTAC CCACCCCCAT CGGAAGAAGC ACTCGGTAAA
AAACCTCAGC GGGTTCCTTA CAATACCCAT AACCTGAAAT TCAGACATTT TGGCCGGAAT
GTCGATTTGC TGATCGCTAA AGCAGTTGCT CTGGAAGAAC CCGAAGAACG ACGGGCTTTT
GTTTCATACC TGGCGCGTTT GATGCGGACC TTTTATCAGG CCTGGAATAA AGAGTCCGTC
GAAGATGAGA CTATTTATCA AAGCCTGATC GAACTCTCGA ACGGTAAACT GTACGACGAC
ATTAAGCTCA TCCGGGAGCA GGGGCTTGTT GAATCGACCC CCCGCGAACG TACCGGCGAC
CAGCCGCAGC GCATCGGGAA CGGTGGTGGC AATAATTTCC GCAACGACCG CAACAATAGT
TCTCAGGGAC GGCCAAACAA CCGAAACGAC CGGAACGGCA ACAATGAAAA CGGGCAAAAC
CCGCGTAATG TCAATAACCG AAATCGGAAC GACAATCCGC AGGGTCGGCC AAATAACCGC
AATGACCGCG ATGGCGGCCA AAATCCGCGG AACTTCGGTA GCCGTAATCG TAACGACCAA
AACAGAAACA ACGACCGTCG CAGACGGTAA
 
Protein sequence
MPHALSPDCL PNARGPTLIT PCPLAHSFVL LLLYHLSGKP LKEYGSSIQK LVDNMVNIDD 
RSTRTRYAHI LIELMRQIHP NMKDGQDYYN KLWDDLYIMS NFTLDVDSPY PPPSEEALGK
KPQRVPYNTH NLKFRHFGRN VDLLIAKAVA LEEPEERRAF VSYLARLMRT FYQAWNKESV
EDETIYQSLI ELSNGKLYDD IKLIREQGLV ESTPRERTGD QPQRIGNGGG NNFRNDRNNS
SQGRPNNRND RNGNNENGQN PRNVNNRNRN DNPQGRPNNR NDRDGGQNPR NFGSRNRNDQ
NRNNDRRRR