Gene Slin_6500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6500 
Symbol 
ID8730286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7885103 
End bp7885816 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content53% 
IMG OID 
Productlipolytic protein G-D-S-L family 
Protein accessionYP_003391256 
Protein GI284041326 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTCT GCATGAATAG TAAATCACTC CATTCTGTGA TAAGCGGATT GTTGCTGGTC 
TTAACGGTCT GGGGCTGTGG CTCGTCCGAT ACGAAAACGA ACGACAACGC CACAAATGCA
CCCACGCAAC AGGCAAAGGA AAAATCGGAT GCTCCGGCCA AAAAACAAAC TGTTCTGTTC
TACGGAAATA GCCTGACGGC TGGTTATGGG GTGGAACCGG CGCAGGCGTT TCCGGCTTTG
ATCGGCAAAA AGATCGACTC GCTCGGCCTG AATTATACCG TTGTCAATGC CGGTTTAAGT
GGCGAAACGA CCGCCGGGGG CAAAAGCCGG ATCGGCTGGG TGCTGCGTCA ACCCGTAGCG
GTGTTCGTTC TGGAACTGGG TGGTAATGAT GGCCTCCGGG GGCTTCCGCT GGCCGATACT
CGCCAAAATT TACAGGCGAT CATGGATACT GTCCGGCTGA AGAGCCCGCA GGCTACAATT
GTGCTCGCCG GTATGCAGAT TCCGCCCAAT ATGGGAACGA GTTACGCCAA AGAATTTCGG
GGGTTGTTCA AAGAACTGGC CGATAAGAAC AAGGCCGTGC TAATTCCCTT TTTGCTCGAA
AACGTTGGCG GTATTCCTAA ACTGAACCAG CCTGATGGTA TTCACCCAAC CCCCGCCGGG
CATAAGATCG TCGCCAACAC GGTTTGGCAG GTTCTCCGAC CGGTATTGAA ATAG
 
Protein sequence
MKFCMNSKSL HSVISGLLLV LTVWGCGSSD TKTNDNATNA PTQQAKEKSD APAKKQTVLF 
YGNSLTAGYG VEPAQAFPAL IGKKIDSLGL NYTVVNAGLS GETTAGGKSR IGWVLRQPVA
VFVLELGGND GLRGLPLADT RQNLQAIMDT VRLKSPQATI VLAGMQIPPN MGTSYAKEFR
GLFKELADKN KAVLIPFLLE NVGGIPKLNQ PDGIHPTPAG HKIVANTVWQ VLRPVLK