Gene Slin_6413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6413 
Symbol 
ID8730197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7771343 
End bp7772332 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content50% 
IMG OID 
Productglycosyl transferase family 9 
Protein accessionYP_003391169 
Protein GI284041239 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTC TGATCCTGCG TTTCTCATCT ATTGGCGACA TTGTGCTGAC AACCCCCGTA 
ATCCGTTGCC TGAAGCAGCA GATGGCGGGG GCCGAAATTC ATTATTGTAC CAAGCGCCAG
TACCAGTCGC TCATTGCCGA TAACCCCTAC ATTGACAGGT GTCATTATCT GGACGATAGT
CTTCCCCGCC TGATCAGTCA GCTTCGACAG GAGCGATACG ACATCGTCAT CGACCTCCAC
AACAACCTTC GTACAACACT GATCAAACAG GCGCTGGGCA AACGGGCGTT TACGTTCGAC
AAAATCAATA TGCGAAAGTG GCTCTATGTG CGCTTTAAAG TAAATGTAAT GCCGTCCGTT
CATATTGTGG ATCGATACAT GGATACGGTG AAGACCCTGG GTGTGGTCAA TGACAACAAA
GGGCTGGACT ACTTTTTACC TGCCGAAGAG CCTATACCAG CTAACTATCT TCCCTATACG
CATCAATCCT CGTTCGTAGC CTATGCCATA GGTGGCCAAC ACGCAACCAA ACGTTTGCCC
GTGGAGCGTA TGATTGAGCT TTGCCGGAAA ATAGACCGAC CTGTCGTACT ACTGGGCGAT
CAGCAGGACC GGGAGTCAGG CGAAATCATT CGTCGGGCAT TGGGCGACTT GCTCATTTAC
AACACGTGCG GCTTGCTTAC GCTCAATCAG TCGGCCTCGC TGGTAAAGCG AGCACAATTG
GTATACAGCC ACGACACAGG TCTTATGCAC ATTGCAGCAG CCTTCAAGAA ACCCATCATT
TCCATTTGGG GCAACACAAC TCCCCGCCTG GGTATGTATC CGTATAATAC CCGGCATCTG
ATTATCGAGA ATACAGCCCT CAACTGCCGC CCCTGCTCAA AAATAGGCCA TGACCGCTGT
CCACTCGGAC ACCATAAATG CATGAATGAT CTATCGTTTA CGTTCGATCC AACCCTTCTT
CAGAATAGCC ACAGGCAGGC ACAGGTATAG
 
Protein sequence
MKILILRFSS IGDIVLTTPV IRCLKQQMAG AEIHYCTKRQ YQSLIADNPY IDRCHYLDDS 
LPRLISQLRQ ERYDIVIDLH NNLRTTLIKQ ALGKRAFTFD KINMRKWLYV RFKVNVMPSV
HIVDRYMDTV KTLGVVNDNK GLDYFLPAEE PIPANYLPYT HQSSFVAYAI GGQHATKRLP
VERMIELCRK IDRPVVLLGD QQDRESGEII RRALGDLLIY NTCGLLTLNQ SASLVKRAQL
VYSHDTGLMH IAAAFKKPII SIWGNTTPRL GMYPYNTRHL IIENTALNCR PCSKIGHDRC
PLGHHKCMND LSFTFDPTLL QNSHRQAQV