Gene Slin_6373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6373 
Symbol 
ID8730157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7722486 
End bp7723832 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content53% 
IMG OID 
ProductFAD linked oxidase domain protein 
Protein accessionYP_003391130 
Protein GI284041200 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA GAGCGTTCCT CAAATTATCA TCGACCCTAA TGGCCGCACC TATACTATCG 
CCACTTGCTG ATCTGGCAGC ACCGGAAAAA CTAAAAAACT GGGCTGGAAA CCTGCAATAC
AGCACCGACC GGCTTTACGA AGGCAAATCA ATTGAACAGG TACGGGACTT TGTCAAAAAA
TACAACAAGC TAAAGGTGCT GGGTACGCGC CATTGCTTCA ACAGCATTGC CGACAGCAAA
GACAATCTAC TGTCGTTAAA GGCGATGGAC GATGTTATTT CGCTGGATAC AAAAGCGCAT
ACCGTAACCG TCGACGCCAG TATGAAATAC GGCCAGTTGG CACCCTACCT CGACAAGAAA
GGCTTTGCCC TGCACAACCT GGCGTCATTA CCCCACATTT CCATTGCAGG AGCCTGCGCC
ACGGCTACGC ACGGTTCGGG CGTGAAGAAC GGCAACCTGT CGACGGCCGT GTCGGGCATG
GAAATCGTTA CAGCCGCTGG CGATGTCCGC ACCCTCTCCC GCGCCAAAGA CGGCGACACC
TTCAACGCAG CCGTTGTGCA TTTGGGGGCG CTTGGGGTGG TAACGAAGGT TACGCTCGAT
GTGCAGCCGA CCTTTATGAT GCGGCAGGAC GTTTACGAAA ACCTGCCGAT GGCCCAGCTC
AAAGAGCATT TTGACGCCAT CGTTTCGGGT GGGTACAGCG TGAGTCTGTT TACCGACTGG
CAGAAAAGCC GCGTTAATGA AGTCTGGATC AAACGCCGGA TCGACAAAGG CGTGAAGCTG
GACGCTAAGC CGGAGTATTA CGGCGCAACG CTTGCCAAAA AGAACCTGCA CCCCATTGCC
GAACTTTCGG CGGTGAACTG CACCGAACAA ATGGGGGTGC CCGGTCCTTG GTACGAACGT
ATGCCGCACT TCCGGATGGG CTTCACACCG AGCAGCGGCA AAGAGTTACA GTCCGAATAT
TTTGTTCCCC GCAAAAACGC CGTTGAAGCG ATACTGGCGG TGGAACGGCT CAAAGCGCAC
ATAAGCCCCC ACCTGATGAT TTCGGAGTTA CGAACCATCG ACGCCGATAA GTTATGGATG
AGCCCCTGTT ACAAGCAACC CAGTCTGGCT ATTCACTTTA CGTGGAAACA GGACTGGGCT
TCGGTCAAGA AGGTCTTGCC CATGATCGAG AAAGAGCTGG CCCCTTTTCA TGCCAGGCCG
CACTGGGGCA AGCTGTTCAC CATGACGCCC GTGCAGCTTC AGTCGCGCTA CGAAAAACTA
CCGGCCTTTA AGCAACTCGT TACCGAGTAC GACCCAAAAG GCAAATTCCG TAACGATTTC
CTGAATACGA CGATCTACGG AATTTAG
 
Protein sequence
MKKRAFLKLS STLMAAPILS PLADLAAPEK LKNWAGNLQY STDRLYEGKS IEQVRDFVKK 
YNKLKVLGTR HCFNSIADSK DNLLSLKAMD DVISLDTKAH TVTVDASMKY GQLAPYLDKK
GFALHNLASL PHISIAGACA TATHGSGVKN GNLSTAVSGM EIVTAAGDVR TLSRAKDGDT
FNAAVVHLGA LGVVTKVTLD VQPTFMMRQD VYENLPMAQL KEHFDAIVSG GYSVSLFTDW
QKSRVNEVWI KRRIDKGVKL DAKPEYYGAT LAKKNLHPIA ELSAVNCTEQ MGVPGPWYER
MPHFRMGFTP SSGKELQSEY FVPRKNAVEA ILAVERLKAH ISPHLMISEL RTIDADKLWM
SPCYKQPSLA IHFTWKQDWA SVKKVLPMIE KELAPFHARP HWGKLFTMTP VQLQSRYEKL
PAFKQLVTEY DPKGKFRNDF LNTTIYGI