Gene Slin_6340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6340 
Symbol 
ID8730124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7691475 
End bp7692737 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content41% 
IMG OID 
ProductSMC domain protein 
Protein accessionYP_003391098 
Protein GI284041168 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.815029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACTG AAAACCCCCG CGTCTGGTTC AAGAGTATCT CACTCGAAAA CGTCCGTTCC 
TTCGGCACAA AGCAGACGAT CAACTTCACC GACAAAGACG GCAATGCCGC CCGCTGGAAT
GTGATTTTAG GCGACAATGG AACGGGAAAG ACGACGGTGT TGAAGTGTAT CTATATTTCG
GCACAGAATT CTTACAGTTT TTATGAGTAT GAGTGGAGTT ATAAAGGCTT AGCTCGAATT
AATAGTAAAG GGCCGAATGT AATGGGTTTA GTGACAGGGG TATTAGGGAT AAATGATAAT
GAGGAGAAAG TAGGGTTTAG TACGAAATAT GTGCCTTTAG AGTCTGGTAG ATTTAGTGTT
GATATTTTAG ATGAGTTTAA TTTTACACTA CCTGAAAGAA ATAATTTTGA GGTAATATAT
GCTTATGGTG CAGCACGACG GATCAGTGCA GGAATATTAA ATAACTATGC GGAAGATGAA
AGACGAGTTG TGAATTTGTT TTCGGAAAAT AGCGCACTAC TAAATGCTGA GAAGTGGCTT
ATTCAAGCAG AGTATATTTC TTTAAAAGAA CCAAAATTTG CTACTCAATT TCTTATAGTT
CTAAATATAT TAAAGAAGCT ATTTAGAGGT GAAGTATCTG ATATATTTAT TAAAACTGAA
ACCGGAGAGC CCAGAGTCTT CTTTAAAACT CACTACGGCG ACGTTCGCCT TCACGAATTA
AGCCTCGGCT ACAAAACCCT AATTGCGTGG ATGGTTGATT TTGCCAAAGG TTTGCTTGAT
CGCTATCCAG ATAGTGAAAA TCCCTTAGCC GAACCTGCCG TTTGTTTAGT GGATGAAATA
GATTTACACC TTCACCCAAA ATTTCAACGA ACGATTATTC AGTTCCTAAC CGAAACGTTT
CCAAATACAC AGTTCATCGT TACGGCGCAT AGTCCGTTGA TTGTTCAGTC GGCAGAGGAT
GCAAACATTA TTTTGCTGAA GCGTGAGGGC AGTGAAACGG TGGTTGCTGA TAGTATAGAC
GTGCATAGCT GGCGTGTTGA CCAGATTCTG AGTAGCGATT TGTTTGGTGG CATAAGCCCC
AGACCGCCAC AGGCAGAAGA TAGAATGCAA CGCCGACGTG CGTTGTTATT GAAAGATAGC
CGAACCGAAA AGGAAGATAA AGAACTGGAG CAACTGGATG AAGAACTGGG TCAGCTTAAG
GCTTCAGAGT CGGAAGAAGC GTTAAAAGCA CTTGAACTAA TTGGGAAAGT TTTGAGCAAA
TAA
 
Protein sequence
MATENPRVWF KSISLENVRS FGTKQTINFT DKDGNAARWN VILGDNGTGK TTVLKCIYIS 
AQNSYSFYEY EWSYKGLARI NSKGPNVMGL VTGVLGINDN EEKVGFSTKY VPLESGRFSV
DILDEFNFTL PERNNFEVIY AYGAARRISA GILNNYAEDE RRVVNLFSEN SALLNAEKWL
IQAEYISLKE PKFATQFLIV LNILKKLFRG EVSDIFIKTE TGEPRVFFKT HYGDVRLHEL
SLGYKTLIAW MVDFAKGLLD RYPDSENPLA EPAVCLVDEI DLHLHPKFQR TIIQFLTETF
PNTQFIVTAH SPLIVQSAED ANIILLKREG SETVVADSID VHSWRVDQIL SSDLFGGISP
RPPQAEDRMQ RRRALLLKDS RTEKEDKELE QLDEELGQLK ASESEEALKA LELIGKVLSK