Gene Slin_6276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6276 
Symbol 
ID8730060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7616274 
End bp7617509 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content56% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391034 
Protein GI284041104 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACG CGCTGTTTCT GTGCTTACTG ACGGCCTCGT CACTGCTGGC TCAAACGGAT 
ACGCCACCGG CCAATGGCCT TAATTTCAAG ATTCAGGTTG TCGATAACCA GATCAGTATT
GGGTATGGGC TGGCCATTGG GGATGTCGAC GGCGACCGGC TTCCCGATAT TCTGCTGGCC
GACCAGAAAG AGTTTGTGTG GTATAAGAAC CCCGGCAATA AGACCAGTAC CTGGCAACGG
CACGTGATGG CCGCCAATCT AACCCCGCAG GATAACGTCT GCATTGCCGC CCGCGACCTG
GACGGTGACG GGCGTGTGGA AGTGGCCGTC GGGGCAGGCT GGAACCCCGC CGAAACCAGC
GATAGTACGA AATCCGGTGC TGTTTTTTAC CTCGTGCGTC CCCAAGACCC GACCCAGCTC
TGGGAGTCCG TTCGGCTACC GCACGAAGTA ACCACCCACC GGATGCGCTG GGCCAGAGTA
GGCAAAGACA GCTATCAGTT AATTGTCGTC CCCCTGCACG GATTGGGTAA CAAGAACGGC
GAAGGTCGGG GCGTCAGAAT TTGGGGATAT GAATTTCCAA AAGACCCGCG TGGAGCCTGG
AAACGCCATC TGGTCGATTC GACCATGCAC CTGACGCATA ACTTCGAGAT TTGGGAAGAC
GGCGAAAACG GGTCGGCTAC GGGCATGATC GTAGCCAGTA AAGAAGGCGG TAATATTTTC
CAGTGGCGAA AAAAGAAATG GCGCTCCGTC GATAGCGAAT CTGCCAACAA TGCACTGCCG
CTACTGACCA ACGAGGTAGC CGGTATTGGC GAAATAAGAC GTCTGGATAA AGGGAAAAGC
GTGGCCACCA TCCAGCCCAT GCACGGCAAT CTGCTTCAGG TCGAAACCGG AAATTACTCG
CTGAAAAAAG TGAAAAGCAA AGAAGCCGGG AAGGAGATTA GTGTACTTTC CGACCTGCTC
AGCCAGGGGC ACGCGCTCGT TTGTGGCGAT TTTCTGGGCA TCGGCAGCGA CCAGATTGTG
GCGGGCTGGC GCAATCCCAA CGCCGACAAA AAAGTGGGTA TCCGTCTCTT TAAACCACAG
GAGCGGGGAA GCGTAACCGG GTATTTACTG GACGACAGTG TACGCATGGC CTGCGAAGAC
CTGCAAGCCG CCGACCTCGA CGGTGATGGC GATCTGGACC TGATAGCCTC CGGTCGGGCC
ACGCTGAATG TGCTGATCTA TTGGAATAAC CGATGA
 
Protein sequence
MKNALFLCLL TASSLLAQTD TPPANGLNFK IQVVDNQISI GYGLAIGDVD GDRLPDILLA 
DQKEFVWYKN PGNKTSTWQR HVMAANLTPQ DNVCIAARDL DGDGRVEVAV GAGWNPAETS
DSTKSGAVFY LVRPQDPTQL WESVRLPHEV TTHRMRWARV GKDSYQLIVV PLHGLGNKNG
EGRGVRIWGY EFPKDPRGAW KRHLVDSTMH LTHNFEIWED GENGSATGMI VASKEGGNIF
QWRKKKWRSV DSESANNALP LLTNEVAGIG EIRRLDKGKS VATIQPMHGN LLQVETGNYS
LKKVKSKEAG KEISVLSDLL SQGHALVCGD FLGIGSDQIV AGWRNPNADK KVGIRLFKPQ
ERGSVTGYLL DDSVRMACED LQAADLDGDG DLDLIASGRA TLNVLIYWNN R