Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6026 |
Symbol | |
ID | 8729807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7310968 |
End bp | 7311546 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
Protein accession | YP_003390787 |
Protein GI | 284040857 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0617339 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAACTCT GCTTTGCCAC AAACAATCAA CATAAACTAG CCGAAGTTTC TGCGAAACTC GGCGATTCGT TCATTCTTAA AACCCTTCAG GATATTGGTT GTACTGACGA ACTACCTGAA ACATCGGGGA CGATTCCGGG TAATTCGCGC CAAAAAGCCG ATTATGTCTG GACAAACTTC GGCGTTTCCT GCTTTGCCGA TGACTCCGGC CTGGAGGTCG ACGCGCTGAA CGGTGAACCG GGCGTCGATT CGGCCTTTTA CTCCGGTAGC CGGGATAGCG AGAAGAACAT TCAGAAGCTA TTGGCCAATT TAAGCAATAA GCCCAGCCGC AAAGCACGGT TTATAACCGT ATTCACGTTG GTGCTACACA GCGTTGAGCA CCAGTTCGAG GGCATTATTG AGGGACAGAT TGTAACGGAA CCTCGCGGCT CCGGGGGCTT TGGCTACGAC CCCGTCTTTC AGCCCGATGG CTACGACCGC ACCTTTGCCG AAATGACAAT TGACGAAAAA GGCCTGATCA GCCACCGGTC AAGGGCACTG GCTAAGATGA TCACGTATCT GCAGAATCAG ATTAAGTGA
|
Protein sequence | MELCFATNNQ HKLAEVSAKL GDSFILKTLQ DIGCTDELPE TSGTIPGNSR QKADYVWTNF GVSCFADDSG LEVDALNGEP GVDSAFYSGS RDSEKNIQKL LANLSNKPSR KARFITVFTL VLHSVEHQFE GIIEGQIVTE PRGSGGFGYD PVFQPDGYDR TFAEMTIDEK GLISHRSRAL AKMITYLQNQ IK
|
| |