Gene Slin_6026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6026 
Symbol 
ID8729807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7310968 
End bp7311546 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content51% 
IMG OID 
Productnon-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 
Protein accessionYP_003390787 
Protein GI284040857 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0617339 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCT GCTTTGCCAC AAACAATCAA CATAAACTAG CCGAAGTTTC TGCGAAACTC 
GGCGATTCGT TCATTCTTAA AACCCTTCAG GATATTGGTT GTACTGACGA ACTACCTGAA
ACATCGGGGA CGATTCCGGG TAATTCGCGC CAAAAAGCCG ATTATGTCTG GACAAACTTC
GGCGTTTCCT GCTTTGCCGA TGACTCCGGC CTGGAGGTCG ACGCGCTGAA CGGTGAACCG
GGCGTCGATT CGGCCTTTTA CTCCGGTAGC CGGGATAGCG AGAAGAACAT TCAGAAGCTA
TTGGCCAATT TAAGCAATAA GCCCAGCCGC AAAGCACGGT TTATAACCGT ATTCACGTTG
GTGCTACACA GCGTTGAGCA CCAGTTCGAG GGCATTATTG AGGGACAGAT TGTAACGGAA
CCTCGCGGCT CCGGGGGCTT TGGCTACGAC CCCGTCTTTC AGCCCGATGG CTACGACCGC
ACCTTTGCCG AAATGACAAT TGACGAAAAA GGCCTGATCA GCCACCGGTC AAGGGCACTG
GCTAAGATGA TCACGTATCT GCAGAATCAG ATTAAGTGA
 
Protein sequence
MELCFATNNQ HKLAEVSAKL GDSFILKTLQ DIGCTDELPE TSGTIPGNSR QKADYVWTNF 
GVSCFADDSG LEVDALNGEP GVDSAFYSGS RDSEKNIQKL LANLSNKPSR KARFITVFTL
VLHSVEHQFE GIIEGQIVTE PRGSGGFGYD PVFQPDGYDR TFAEMTIDEK GLISHRSRAL
AKMITYLQNQ IK