Gene Slin_5991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5991 
Symbol 
ID8729772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7262883 
End bp7266914 
Gene Length4032 bp 
Protein Length1343 aa 
Translation table11 
GC content54% 
IMG OID 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_003390752 
Protein GI284040822 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTGGT TAACCGCCCT TTCAGGGTTA ACCGCATCCT CACTTCTGAC GGCTCAATCT 
TTGCCTCAGT ATAGTACCCC GCAGCGGGTT CAACAAAACC AACTCAGAAA AACGATTGAA
CAAACGCAGG CTGAAAACTA CCGCACAGCC CTTTCAGCAG CACAGCGGCT AAATCGCCCC
GTCAAACAGA TTTCGCCTTC CGGACGGGTC ATGATGCTGC GCGAGATTAC CGCTACCGGC
GAACTCATCT ACGACGCTAC TTACAGCACA ACTAAAGCGG GCATAAGCAC CCGCACCAAC
TCACTGTATG CGGGGGGCAG CCTGGGTCTT TCGCTCTCGG GAAGTACACT GACCAATAAA
CTGGGTGTTT GGGATGGTGG TAGAGTGAGA GCTACGCACG TCGAGTTTCG GAATGGAACG
GGCAGCCGGG TCGTTCAGGT CGACTCGTCG GCTACGCTGG TAAGTCACTC GACCCACGTG
GCTGGTATTC TGATGGCGGC CGGTGTAAAC CCGCAGGTAA GAGGCATGGC CTATGGTACC
AATCTGCGCG CTTATGACTT CAATTCCGAC GTAACCGAAA TGAGTGCCGC AGCCTCTAAC
CTGCTGATAT CGAACCACTC ATACGGTACA AATGCCGGGT GGGTGTATAA CGATAGTCGC
AGCGGCAACA TACAGTGGGA GTGGTGGGGC GATACAACCA TCAGTAAAAC AGAAGATTAC
AAATTCGGAT TTTACAACTC TGCAACAGCC ACCTGGGACC GAATCGCTCA GAATGCACCT
TATTACCTGA TCGTGAAGGC GGCAGGTAAC GACCATAGCT CCAATGGACC CGGTGCAGGA
CAACCCTACT ACCTCGGCTC TGGCCGGACT ACCAGTACGC AGCCCCGAAA CAGTCAGGAT
GCATACGACC AGATAAGTAC GTACGCGAAC GCCAAAAACA TTCTAACCGT AGCGGCCGTA
GGAAACCTGA ATTTTGGCTA TAACCAATCG GCAGACGTTC CACTGAGCGA TTTCACCAGT
TGGGGGCCAA CGGATGATGG CCGTATAAAG CCCGACATTT CCGGCATAGG CGTCGGTATC
CTGTCATCAA GTTCGGAAAG CGACAGCGCT TATGTCGTTT ACGACGGTAC GTCGATGGCA
ACGCCCAATG TGGCGGGGTC CCTACTCCTA CTTCAGGAAT TATATGCGCA GCGCAACAGC
GGCAAGTTTA TGCGGTCGTC GACCCTGAAA GGGCTGGCCT TGCATACGGC CGACGAAGCA
GGCAGCGCTC CCGGTCCCGA TTATCGATAT GGCTGGGGAC TACTAAACGC CGAGCAGGCC
GGACGGGTCA TTTTAAACAC TAACCAGAAT CACCTGCTTG ACGAACGCAC CCTAAACCAG
GCCGAAACGT ACTCACTAAC AGTGGTCGCG TCCGGGCTTG GGCCGCTGGT TTCCACCATC
TGCTGGACAG ACCCCGCCGG TACCGCCAGT ACCGTTTCGG TGGCAAACCT GAATAACCGA
ACGCCCAAGC TTGTCAATGA TCTCGATGTA CGTATCAGTG ATGGCACCAA CGCTATTCTG
CCCTGGGTGC TGGACCCCAA TAATCCATCG GCAGCCGCCA CACAGGGCGA TAACATCCGC
GACAACGTAG AACAGGTACT GATTTCGAAC CCGATACCGG GCCGGTCCTA CACAATTACG
GTCACCAGTA AAGGCACCCT GAGTGGCGGC AAGCAGGATT ACGCCCTGCT CATCAGCGGT
ATTGGCGGGA AAGCTTACTG TACGTCGGGA GCTACCTCAA CGGCCGACAC AAAGATCAAT
CAGGTACAAT TCAGTAACAT TAACCAGGCT GGGGCAGCGG GTTGTACGTC ATATACCGAT
TTCTCCCAGT CGGTAGGCAC GGTGCAGATC GGTCAGCAAA TTCCGCTCAC CGTATCCCTG
GGCACCTGTG GGGCTACGAG AAATGTAATC GTGAAAGCTT TCGCCGACTG GAACCAGAAC
GGCAGTTTCG ATGACGCGGG CGAAACCGTG GCGGTATCGG GTGTCCTGTC GAACTCCGCC
CAGTTTACGG CTACGGTAAC CATCCCGACC AATGTCCAGA CAGCGCAGAA TGTACGCTTC
CGGATTGTAG CGGTAGAAAC GGAGAATGCA GCTTCTGTTG TAGCCTGTGG CAATTACGGC
AATGGCGAAA CGCAGGATTA TGTCCTGAAC GTGATACAGA CTACGAATGA TGTAGGCGTT
ACGGCTCTTG TTTCGCCGGA ATCGAATTTC TGCGCTCAGA CCGGTTCTGC CCTTACGGTA
GCTGTCCGGC TGCACAACTA CGGTACGGCA AACCAAACCG ACGTACCGGT TAGTGTCAGA
ATTACGGATG CAAACAACAA TACAGTTACG ACCCTGACTG GCACCGTTCC CCGAATCACG
GCTTTCAGGG AGAGTACAGT CTCACTGACC TTACCCGCAA GCGTTGTATT AGCGCCCGGT
CAAACGTACC AGTTCATCAT TTCGTCGGGC CTTGGGACTG ACCAGAACGC GGCTAATAAC
AACCTCACGG TAACCCGTTC AACAGCACTC GCCCCATCGA ACGGCGTATT TTCGGTCACC
CGTTGCGGCA GCGATACGAC CATTTCATTG CGAAATATTG GCGAAGGAAC GGCTTTCTGG
TACGACGCCC CAACGGGCGG AAATTTACTG GCAGCAGGTA ATCAGGTGGC GGTTAAATCG
ATACCCGCCA GCGGCCAATT CTACGCGTCC CTGAACACAT TTTCGGGTAC AATCGGGCCG
GTTAACAAGA ATGTGTTCGG GGGAGGATCA TACGGAACAG CGTTCCAGCC TGCCCCACTC
ATTACAACAC AGGTGCCGCT CCTGATTGAA AATGCCCGAC TGTATATTGG CTCGGCGGGT
ACGATTACGT TCACCGTTCG ACGATACGAT AACACCGCCG TATCAAGCGT AACGCTGGAC
GTTACACCAA CGCGCACCCA AAGTGTGACA GCCGCCAGCG GTGGCGTTTA CCCCGACGAC
CCAAATGATG AAGGGGCTAT TTACCCGCTG AATCTGCGAA TTCCGGCAGC CGGTGACTAC
AAGATCACCA TTGATTACGG CGATGGAGCG TCTATTTTTC GGAGTAATTC TGCCGTTACG
GGGCTACCCT ATCAGCTAAA AACGCAAGGC GGACAGCCGG TCGTTACTAT CAAAGGCGCT
CTGTTTAACA ATGGAACGTC GACCGATACC TTGAAAACAG CCTGGTATTA TTTTTATAAC
ATGAGCGTCC GATCGCTGGA TTGTCCGGGG CCACAACGCG TTGCAGTCAC TCCAACAGCG
GGTCAGGGAA CTACAGCAGC GATAACGCCC AATGGGTCAA CCAGCATTTG CCAGGGCTCC
AGTATCGTTT TACGAGCGAA CACGGGCACC AATCTTACGT ACCAGTGGTA CCGCAATGGA
CAGGCTATTT CCGGCGCGAC AAGCAGTACG CTCCTTACCG CGACAGCCGG AAGTTACATT
GTTCAGGTGT CTAATAATTG CTTGCCGGTT AATTCGGCTG CAGTAGCCAT CAATATACAG
ACTCCACAAA CGCCTACGAT CACGGCCAAC GGGTTTACCC TGACATCGAA CGCAACAACC
AACGTTCAAT GGCTGCTCGA TGGAGTACCC ATCTCGGGGG CCACTTCACC TACCTATACG
GTTGTGAAAA CCGGACGATA TTCAGTAAAA GGCAACGTCA ATGGGTGTGG CGAATTAATT
TCAGATGAAG TTTACCTGAC CATTCTGGCC ACCGAGCCCG TTACGGACGA CGTCAATCTG
AGTGTGTATC CTAATCCGGC AATGCGCCAA CTAACCGTAT CGCTGATAGA TGCCTCCATT
TCGACCAAGG TACCCACGGT GCGACTGACT AACCTGACGG GCCAGACCGT TCGTACGGCA
ACCCTGCAAC GGGACGGAAA AAGTTATTCA ACAATTTTTG ATGTTACAGA CTTACCAGGC
GGTACGTTTT TTGTAATTGT AGAAGACGAC CAGACGCAAA GCGTCCGGGT GAAACGGATT
CGCAAGCAAT AA
 
Protein sequence
MGWLTALSGL TASSLLTAQS LPQYSTPQRV QQNQLRKTIE QTQAENYRTA LSAAQRLNRP 
VKQISPSGRV MMLREITATG ELIYDATYST TKAGISTRTN SLYAGGSLGL SLSGSTLTNK
LGVWDGGRVR ATHVEFRNGT GSRVVQVDSS ATLVSHSTHV AGILMAAGVN PQVRGMAYGT
NLRAYDFNSD VTEMSAAASN LLISNHSYGT NAGWVYNDSR SGNIQWEWWG DTTISKTEDY
KFGFYNSATA TWDRIAQNAP YYLIVKAAGN DHSSNGPGAG QPYYLGSGRT TSTQPRNSQD
AYDQISTYAN AKNILTVAAV GNLNFGYNQS ADVPLSDFTS WGPTDDGRIK PDISGIGVGI
LSSSSESDSA YVVYDGTSMA TPNVAGSLLL LQELYAQRNS GKFMRSSTLK GLALHTADEA
GSAPGPDYRY GWGLLNAEQA GRVILNTNQN HLLDERTLNQ AETYSLTVVA SGLGPLVSTI
CWTDPAGTAS TVSVANLNNR TPKLVNDLDV RISDGTNAIL PWVLDPNNPS AAATQGDNIR
DNVEQVLISN PIPGRSYTIT VTSKGTLSGG KQDYALLISG IGGKAYCTSG ATSTADTKIN
QVQFSNINQA GAAGCTSYTD FSQSVGTVQI GQQIPLTVSL GTCGATRNVI VKAFADWNQN
GSFDDAGETV AVSGVLSNSA QFTATVTIPT NVQTAQNVRF RIVAVETENA ASVVACGNYG
NGETQDYVLN VIQTTNDVGV TALVSPESNF CAQTGSALTV AVRLHNYGTA NQTDVPVSVR
ITDANNNTVT TLTGTVPRIT AFRESTVSLT LPASVVLAPG QTYQFIISSG LGTDQNAANN
NLTVTRSTAL APSNGVFSVT RCGSDTTISL RNIGEGTAFW YDAPTGGNLL AAGNQVAVKS
IPASGQFYAS LNTFSGTIGP VNKNVFGGGS YGTAFQPAPL ITTQVPLLIE NARLYIGSAG
TITFTVRRYD NTAVSSVTLD VTPTRTQSVT AASGGVYPDD PNDEGAIYPL NLRIPAAGDY
KITIDYGDGA SIFRSNSAVT GLPYQLKTQG GQPVVTIKGA LFNNGTSTDT LKTAWYYFYN
MSVRSLDCPG PQRVAVTPTA GQGTTAAITP NGSTSICQGS SIVLRANTGT NLTYQWYRNG
QAISGATSST LLTATAGSYI VQVSNNCLPV NSAAVAINIQ TPQTPTITAN GFTLTSNATT
NVQWLLDGVP ISGATSPTYT VVKTGRYSVK GNVNGCGELI SDEVYLTILA TEPVTDDVNL
SVYPNPAMRQ LTVSLIDASI STKVPTVRLT NLTGQTVRTA TLQRDGKSYS TIFDVTDLPG
GTFFVIVEDD QTQSVRVKRI RKQ