Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5960 |
Symbol | |
ID | 8729741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7225303 |
End bp | 7226775 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | phytoene desaturase |
Protein accession | YP_003390721 |
Protein GI | 284040791 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAGC GAGTTCTTGT TATTGGGGCC GGATTTGCCG GGCTTGCTGC TGCGACCAGT CTTGCCGATA AAGGTTACGA TGTCACAATT CTTGAAAAAA ATTCCATACC TGGTGGACGT GCCCGCGTAT TTGAGGCTGA AGGATTCACC TTCGATATGG GGCCGAGTTG GTACTGGATG CCTGACGTTT TTGATACCTA CTTTGCCCGT TTTGGTAAGA GAACAAGCGA TTACTACAAC CTTGTTCGGC TCGACCCTTC CTATAAAGTC GTTTTCGGTC CCAACGAGGC TGTAGACCTC CCAGCCGGAC TGGATAACTT AGAGGCCCTG TTTGAAGGAA TTGAGCCGGG TAGTGGTACC AGGTTACGGC AGTTTTTAAA GCAGGCTTCC TACAAGTACG AGGTTGGCAT GAATAAATTC GTCTGGAAAC CCAGTCGGTC GGTAACCGAA TTCTTAAGTC TGAAGCTGTT ATTCGATGTT ACGCGCCTTG ATGTATTCCA ATCATTTGCG TCGCACGCCC GTAAGTTTTT CACTCACCCT CGCCTACTGG AAATCGTCGA GTTTCCGGTC CTGTTTCTAG GTGCCACACC CGAAAATACC CCTGCCATGT ATAGTCTGAT GAACTATGCC GAGATGGCCC TGGGTACCTG GTATCCAATG GGTGGTATGC ATGAGATTGT CAAAGCGATG GTTCGTCTGG CCGAAGAGAA AGGAGTTAAA ATTCTATTGA ATCAGACCGT TCAAAAGATT GATATACAGA AGAAAACGGC CCAGCGCGTT ATTACGACAG AAGGTATTTT TGAAACCGAT GTGGTAGTGG CCGGCGCCGA TTATAACCAT GTTGAAACAA GCCTGATCGA CGAAACGAAC CGGAACTATG ATGATGCGTA TTGGAAAAGT CGCGTTATGG CACCCTCATC ACTCCTGTTC TACCTGGGCG TAAATAAACG TCTACCCCGA CTGCTGCACC ATAATCTGTT CTTTGACGAA GACTTTAAAG TACACGCTCA GGAAATTTAT GAAACACCAC GCTGGCCTTC CAAGCCCTTG TTTTATGCCT CTGCTCCGTC AAAAACAGAC CCCGGCATTG CCCCTGAAGG TTGCGAGAAC CTGTTTCTGC TGATTCCCGT AGCCCCGGAC CTTACAGATG ACGAAGCAAC TCGCGAACAT TACTATAACT TAATCATGAA CCGGCTCGAA GCCTATGTAG GTGAGGATAT TCGCAACCAT ATTGTCTTTA AACGTAGTTA TGCCCACAAT GATTTTAAAC AGGACTACAA TGCATTCCGG GGCAATGCAT ATGGACTGGC GAACACCCTG CGTCAAACGG CGATTTTAAA GCCGTCCTTG AAGAATAAAC AGGTCAACAA CCTATTTTAT ACCGGTCAAC TTACTGTACC TGGCCCGGGC GTCCCGCCTT CGCTCATATC AGGACTGGTT GTAGCCGACG AAGTAGCCAG AGAATTCAAC TAA
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Protein sequence | MPKRVLVIGA GFAGLAAATS LADKGYDVTI LEKNSIPGGR ARVFEAEGFT FDMGPSWYWM PDVFDTYFAR FGKRTSDYYN LVRLDPSYKV VFGPNEAVDL PAGLDNLEAL FEGIEPGSGT RLRQFLKQAS YKYEVGMNKF VWKPSRSVTE FLSLKLLFDV TRLDVFQSFA SHARKFFTHP RLLEIVEFPV LFLGATPENT PAMYSLMNYA EMALGTWYPM GGMHEIVKAM VRLAEEKGVK ILLNQTVQKI DIQKKTAQRV ITTEGIFETD VVVAGADYNH VETSLIDETN RNYDDAYWKS RVMAPSSLLF YLGVNKRLPR LLHHNLFFDE DFKVHAQEIY ETPRWPSKPL FYASAPSKTD PGIAPEGCEN LFLLIPVAPD LTDDEATREH YYNLIMNRLE AYVGEDIRNH IVFKRSYAHN DFKQDYNAFR GNAYGLANTL RQTAILKPSL KNKQVNNLFY TGQLTVPGPG VPPSLISGLV VADEVAREFN
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