Gene Slin_5948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5948 
Symbol 
ID8729729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7208689 
End bp7209303 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content49% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390709 
Protein GI284040779 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGGATC ACTTTACTAC GTATTTCCCG CCCACAGCTG CCACTTATTG CTATCAGTTG 
TGGGAAGAGT ATAAATTTAT TTTTCGGGTG GTCAGACCCC GGCAAACACG CCTGGGAGAC
TTTCGGGTAC TTCCGCATAA TCAGACTCAA ATTACAGTCA ATGCCAACCT GAACCCGTAT
GCGTTTCTGA TTACCTATGT TCACGAAGTG GCCCATGCTG CGGTGAACAG CCAATACAAA
CGGCGTGTTC AGCCACACGG TAAAGCCTGG CAAATGGCCT TCCAACGGCT GATGGAGCCA
ATCATGACAG ATATCGTCTT CCCAGAAGCA ATTCTCTTAC CGCTCCGGCA GTATATGGCA
AAGCCAGCTG CTACCACATA TGCCAACCCG GCTTTAATGA GCGCCTTGCG TCAACAGGAT
AACATAGAGG TAAGTACGTC GGGTGGGCAT AAGGTGCTCC TTAGTCATGT ACCCGAAGGC
CAGCTGTTTG AGTTCGCTAA AAAGACTTAC CAACGGGGTA CGCTTCGGAG AACTCGCGTC
GTTTGTAAAG AGATGTCGTC GGGTAGGTCG TATGCTATAC TGGCTCATGC ATGGGTGGAA
ATAAAAGAAC AATGA
 
Protein sequence
MTDHFTTYFP PTAATYCYQL WEEYKFIFRV VRPRQTRLGD FRVLPHNQTQ ITVNANLNPY 
AFLITYVHEV AHAAVNSQYK RRVQPHGKAW QMAFQRLMEP IMTDIVFPEA ILLPLRQYMA
KPAATTYANP ALMSALRQQD NIEVSTSGGH KVLLSHVPEG QLFEFAKKTY QRGTLRRTRV
VCKEMSSGRS YAILAHAWVE IKEQ