Gene Slin_5941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5941 
Symbol 
ID8729722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7199664 
End bp7201244 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content53% 
IMG OID 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_003390702 
Protein GI284040772 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGCCG ACTATACCGA AGCCCCTGTA TGCCATATTG ATGACTTGGC CGATGGTGAT 
CTGAAAGAAG TTCGTGTTGG CGATACCGAT GTGTTGCTGG CCCGCGCCAA TGGACAGTTT
TATGCACTTC ACCCAAAATG TTCACATTAT CAGGGGCCTT TAGCGAAGGG GTTGCTGAAC
GGACACCGGC TGGTTTGTCC GTGGCACAAT GCCTGTTTCG ACATTAGGGA TGGCCATCGA
CTCGAAGCAC CTGCGCTTAA TGGATTACCA ACCCACGAGG TACGCATCGA AGGAGATCAG
GTGTTTGTAC GGCTAACGAC GGATAAAGAA AGCTTGGAGA ATCCCATGTC TGCGCCAGAC
ACCGCTAATT CCGAAACATA CGTAATCATC GGCAGTGGCG GAGCGGGCGC GTTTGCCGCC
GAGGGCATAC GTGAAGGTGG TTTTACTGGT AAAATCGTCA TGCTCACTGC CAGCGGAGAA
GCGCCGTATG ACCGCCCAAA TTGCTCGAAG GATTACTTGC AGGGCGAAGC ACCCGACGAA
TGGATGGCAC TCCGCCCGGA AGAGTTCTAC AAGAGTTACG GTATTGAGAT CCGGACTAAT
CAGCCTGTAA CGGCACTAAA TCCGATAACG AAGCAGATTG AACTCGCATC GGGCGAAATC
ATCGGCTATG ACAAGGCGCT TCTGTGTACT GGCGGTAAGC CCAACAAGTT GCCTGCCGTC
GATTTGGCGC TTAAGGGCGT TTACACGCTG CGAAGCCTGC ACGATAGCCA GACCCTGCGC
GACCTGGGGA AACAAGGGAA GCGGGTCGTT ATTGTGGGGA GTTCATTCAT TGGACTGGAA
GGCGCCATGA GCCTGCGGAA ACTTGGCAGT GAGGTAGATG TTGTTGGGCC GGAGACGACG
CCTTTTGAGA AAATTCTGGG CGCCCGGATT GGCCGGGTTA TTCAGGGCTG GCATGAGGCA
GCGGGCATTC GGTTTCATCT GGGCCGGAGA CTGGACCATC TGGAAGGAGA AGAGACCGTT
AACGCGGTGG TACTCGACAA TGGTGAGCGT CTGCCCGCCG ATTTTGTACT GATTGGTGCA
GGTGTTAAAC CTCGAACGGA CTTTCTGAAA GGCATTCCTG TTGAGAAAGA CGGAGGTGTG
CGAACCGACG AATACCTGAA AATAACGGAC GGCCTGTATG CTGCGGGCGA CATCGTTCAC
TACCCTACGT CAGACGGAAT ACAACGTATT GAGCACTGGA AAGTGGCGGG TCAGCAGGGA
CACGTGGCCG GGTTGAACAT GGCCGGTAAA GAAACGCCGT ACCAGATGGC GCCCTTTTTC
TGGACCAACC AACAGGGCAA GCGAATCAAT TACGTTGGGC ATACTACACA GGTTGATGAT
ATACTGTATG ATGGCAATCC GGAAACCGAC GAATCGTTCC TGGCTTTTTA CGTTCAAAAT
AATCAGATTA AAGCCGTAGC CGGACTTAAA CGTGATCAGG ATATTATTGC GATTCGGGAG
CTGATGCAGG CCGGGAAAAT GCCATCGGTA GAGGCTGCTC GAAACGGGAT AAAGTGGGTC
GACGAGCTGA AAAAAGCCTG A
 
Protein sequence
MIADYTEAPV CHIDDLADGD LKEVRVGDTD VLLARANGQF YALHPKCSHY QGPLAKGLLN 
GHRLVCPWHN ACFDIRDGHR LEAPALNGLP THEVRIEGDQ VFVRLTTDKE SLENPMSAPD
TANSETYVII GSGGAGAFAA EGIREGGFTG KIVMLTASGE APYDRPNCSK DYLQGEAPDE
WMALRPEEFY KSYGIEIRTN QPVTALNPIT KQIELASGEI IGYDKALLCT GGKPNKLPAV
DLALKGVYTL RSLHDSQTLR DLGKQGKRVV IVGSSFIGLE GAMSLRKLGS EVDVVGPETT
PFEKILGARI GRVIQGWHEA AGIRFHLGRR LDHLEGEETV NAVVLDNGER LPADFVLIGA
GVKPRTDFLK GIPVEKDGGV RTDEYLKITD GLYAAGDIVH YPTSDGIQRI EHWKVAGQQG
HVAGLNMAGK ETPYQMAPFF WTNQQGKRIN YVGHTTQVDD ILYDGNPETD ESFLAFYVQN
NQIKAVAGLK RDQDIIAIRE LMQAGKMPSV EAARNGIKWV DELKKA