Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5941 |
Symbol | |
ID | 8729722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 7199664 |
End bp | 7201244 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_003390702 |
Protein GI | 284040772 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATAGCCG ACTATACCGA AGCCCCTGTA TGCCATATTG ATGACTTGGC CGATGGTGAT CTGAAAGAAG TTCGTGTTGG CGATACCGAT GTGTTGCTGG CCCGCGCCAA TGGACAGTTT TATGCACTTC ACCCAAAATG TTCACATTAT CAGGGGCCTT TAGCGAAGGG GTTGCTGAAC GGACACCGGC TGGTTTGTCC GTGGCACAAT GCCTGTTTCG ACATTAGGGA TGGCCATCGA CTCGAAGCAC CTGCGCTTAA TGGATTACCA ACCCACGAGG TACGCATCGA AGGAGATCAG GTGTTTGTAC GGCTAACGAC GGATAAAGAA AGCTTGGAGA ATCCCATGTC TGCGCCAGAC ACCGCTAATT CCGAAACATA CGTAATCATC GGCAGTGGCG GAGCGGGCGC GTTTGCCGCC GAGGGCATAC GTGAAGGTGG TTTTACTGGT AAAATCGTCA TGCTCACTGC CAGCGGAGAA GCGCCGTATG ACCGCCCAAA TTGCTCGAAG GATTACTTGC AGGGCGAAGC ACCCGACGAA TGGATGGCAC TCCGCCCGGA AGAGTTCTAC AAGAGTTACG GTATTGAGAT CCGGACTAAT CAGCCTGTAA CGGCACTAAA TCCGATAACG AAGCAGATTG AACTCGCATC GGGCGAAATC ATCGGCTATG ACAAGGCGCT TCTGTGTACT GGCGGTAAGC CCAACAAGTT GCCTGCCGTC GATTTGGCGC TTAAGGGCGT TTACACGCTG CGAAGCCTGC ACGATAGCCA GACCCTGCGC GACCTGGGGA AACAAGGGAA GCGGGTCGTT ATTGTGGGGA GTTCATTCAT TGGACTGGAA GGCGCCATGA GCCTGCGGAA ACTTGGCAGT GAGGTAGATG TTGTTGGGCC GGAGACGACG CCTTTTGAGA AAATTCTGGG CGCCCGGATT GGCCGGGTTA TTCAGGGCTG GCATGAGGCA GCGGGCATTC GGTTTCATCT GGGCCGGAGA CTGGACCATC TGGAAGGAGA AGAGACCGTT AACGCGGTGG TACTCGACAA TGGTGAGCGT CTGCCCGCCG ATTTTGTACT GATTGGTGCA GGTGTTAAAC CTCGAACGGA CTTTCTGAAA GGCATTCCTG TTGAGAAAGA CGGAGGTGTG CGAACCGACG AATACCTGAA AATAACGGAC GGCCTGTATG CTGCGGGCGA CATCGTTCAC TACCCTACGT CAGACGGAAT ACAACGTATT GAGCACTGGA AAGTGGCGGG TCAGCAGGGA CACGTGGCCG GGTTGAACAT GGCCGGTAAA GAAACGCCGT ACCAGATGGC GCCCTTTTTC TGGACCAACC AACAGGGCAA GCGAATCAAT TACGTTGGGC ATACTACACA GGTTGATGAT ATACTGTATG ATGGCAATCC GGAAACCGAC GAATCGTTCC TGGCTTTTTA CGTTCAAAAT AATCAGATTA AAGCCGTAGC CGGACTTAAA CGTGATCAGG ATATTATTGC GATTCGGGAG CTGATGCAGG CCGGGAAAAT GCCATCGGTA GAGGCTGCTC GAAACGGGAT AAAGTGGGTC GACGAGCTGA AAAAAGCCTG A
|
Protein sequence | MIADYTEAPV CHIDDLADGD LKEVRVGDTD VLLARANGQF YALHPKCSHY QGPLAKGLLN GHRLVCPWHN ACFDIRDGHR LEAPALNGLP THEVRIEGDQ VFVRLTTDKE SLENPMSAPD TANSETYVII GSGGAGAFAA EGIREGGFTG KIVMLTASGE APYDRPNCSK DYLQGEAPDE WMALRPEEFY KSYGIEIRTN QPVTALNPIT KQIELASGEI IGYDKALLCT GGKPNKLPAV DLALKGVYTL RSLHDSQTLR DLGKQGKRVV IVGSSFIGLE GAMSLRKLGS EVDVVGPETT PFEKILGARI GRVIQGWHEA AGIRFHLGRR LDHLEGEETV NAVVLDNGER LPADFVLIGA GVKPRTDFLK GIPVEKDGGV RTDEYLKITD GLYAAGDIVH YPTSDGIQRI EHWKVAGQQG HVAGLNMAGK ETPYQMAPFF WTNQQGKRIN YVGHTTQVDD ILYDGNPETD ESFLAFYVQN NQIKAVAGLK RDQDIIAIRE LMQAGKMPSV EAARNGIKWV DELKKA
|
| |