Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5932 |
Symbol | |
ID | 8729713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 7187131 |
End bp | 7190679 |
Gene Length | 3549 bp |
Protein Length | 1182 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | protein of unknown function DUF1549 |
Protein accession | YP_003390693 |
Protein GI | 284040763 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.453716 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGTCT GGTCAGACAT ACGATTCAAA TACGTTTTCC TCAGCGCAAC GGCTGGCTTG TTTGGGACGT CTATCTGGCT AACGTCCTGC CAGAGTTCAG TCGAAAAGCC GGCCGAGATT GTGGCCGTCG AGGCAACGCT CCCCGAAAAA GTTGATTATA ATCTGCACGT AAAGCCGATC CTGTCTGACC GTTGTTTTGC GTGTCATGGC CCCGACAAAG CCAAGCAACA GGCGGGTTTA CGCCTGGATA CGCCCGATGG TGCTTACGAA GCCCTGGCGA AAAGTGGCCA CAAGGCTATT GTGCCGGGTA ATCTGGCCAA GAGTGAACTG GTCAGCCGTA TCCTCAGCAC CGATCCGGAG GAGATGATGC CCACGCCCAA GTCGAACCTG ACCCTGACAA CGGAAGAAAA GGCGATGCTG ATTCGCTGGG TTGAGCAGGG GGCCGAATAC AAAGAACACT GGTCGCTTAT TGCGCCGACC CTGCCGGAGA TTCCGAAAGT AAAAGACGAA AAATGGGTTG TCAATGATAT TGACGGGTTC ATCCTGGCCA AACAAGAAGC AAAAAAAGTA AGCCACGCAC CCGAAGCCGA TAAAACCACC TTGCTCCGCC GGGTAAGCCT CGACCTGACG GGCTTACCAC CAACACCCGC CGAAGTCGAC GCTTTCCTGG CTGATAAATC CCCCAATGCC TACGAAAAAG TAGTGAATCG GCTGCTCAAC AGTCCGCATT ATGGCGAACG GCAGGCCGTC GAATGGCTCG ATGTGGCGCG GTATGCCGAT ACGCACGGGT ATCAGGATGA TGGACTTCGA ACCATGTGGC CGTATCGGGA TTGGGTTATT CGGGCCTATA ATCACAACCT TTCGTTCGAC CGCTTTATAA CCTGGCAACT AGCGGGTGAT TTGCTGCCCA ATCTGAACGG CTCGAAAGAC AAGCGCGAGA AACTCATTGC CACCGCCTTC AACCGCAATC ACCAGCAAAG CCAGGAAGGT GGAATCGTCG ACGAAGAATA CCGGACTGAA TACGTTGCCG ACCGGACCAA TACCTTTGGG AAAGCGATGC TGGGGCTAAC GGTCGAGTGC GCCCGTTGCC ACGACCACAA ATACGACCCC ATCAGTCAGA AAGATTATTA TTCGCTCTAC GCCTTTTTCG ATAGCAACAA CGACCGGGGC CAGATTCCCT ACAACGGCGA AGCTGCCCCG ACGATTACCC TTACCAAGCC CGAAACGGAA GCGAAACTGC GCTTTATCCG CGAAAAATTA ACGCCCATTC AACAGCAGCT CAATCTTAAC CGGCCCGACT ATCAGCAGCG TTTTGGGCAA TGGCTGGCGA AAACCCGTGT GGTGTCGTCT ATCGATTCCG GGTTGTTGGC GCATTATACG TTCGATGAAG CCGACCGGAC GGATATCGGC GCTTACGTAA AAGCGAAAAA CGAGGAACGG AAACGCGAAG AGGAAAAGAA GAAACGCGAG GAAGACGCAA AACGAAAGAA AGAGGGCATA GCCAAAGCCG GTAAGCCAGA GGCTAAACAA CCTGAGAAAA AAGAACCGCC CAAGCGTAAA ACAAAAGAAG AACTTTGGAA AGACCCACGA AATGCCTTTG CTAACTCGGT GAACGATACC ATTCCGGCCC GCCTGGGGGG CGACCCTGAT AAAGTGCCTT ACGTTGTTCC CGGCCGCTTT GGAAAAGCCC GGTATCTGGC AGGCGACAGT TTCATTGAAC TACCCGGAAA CTTCGCGGTC TTCGAGCAAA ATGAGCCGTT TACCGTAAGC AGTTGGTTCA ATCTGGCCAA GCCAAATATG GCCCTGACAC TGATGGGACG AACCACCGGC CCAATGGATG GTCAGCGTGG TTACCAACTT GATTTGTTGA GCGACGGTCG GCTCAAGCTG GCGTTTAGTC ACGTATGGCC TGCTAATGCC ATTGACGTTG AGACGATTGA AAAAGTCCCG GTCCATCAAT GGTTCCAGGT CGCTTTTGCC TACGATGGTA CCGGCCGGGC CAACGGGATT TCCCTGTACC TGAATGGGCG GCCACTTCGC ACGAAGATCA TCGCCGATAA CCTGATACAC AGCATGGTGT ATGGCAAAAA CAGAAGCCAT TGGGCGCAGC ACCCCTTTTA TGTGGGCCGA ATGCACGATA ACTTTTACAA AGACTTTGCC GTCGATGAAC TGCGTATCTA TAACCGTTGC CTGACACCGC TGGAAATGCC AAAACTGGCG GGACAGCCGG ATGCACTCAT GGCCGCGCTG CAAACGCCCG CTGCCAATCG GACACCGGCT CAACGGACAG GCTTGTATAC GTATTACGTC AGAACGCAGG ACCCCGTTTA TAAAACGACC TATGCTAATG CTATGAAGTT GCGGGGCGAA CAAATCACCC TGTATACCGA CTCCGATCAG CTTATGGTCA TGCAGGAGCG GTCGGTGCCA CGCGAGACAC ATCTGCTCAA AAGAGGGGCC TATGATGCCC CCGGTGAGGT CGTGAAACCG GCCGTGTTGC ATAGCCTCAA TCCGTTGGAG GACGACATGC CGACGAATCG GCTTGGCCTG GCAAAATGGT TACTGGCACC CGAAAACCCG CTGTTTAGTC GGGTGATGGT GAACCGTATG TGGCAGCAGT ATTTCGGGCA GGGGCTTGCT AAAAACAGCG ACGATTTCGG GAACCAGGGC GCGTTACCCA GTCACCCCGA ATTGCTGGAC TACCTGGCGA TGAAATTCCG CGACATGGGC GAATGGGGCG GGCAGTGGAA TACAAAAGCC ATGCACAAGA TGATTGTTAT GTCGGCAACG TACCGGCAAT CGTCGAGCGT ACCCGAAAAT GTTCGGGAGG CTGACCCGGA TAACACCTAC CTGACGCGTG GGCCAAGTTA CCGCATGTCG GCCGAGCAGG TTCGGGATAA TGCGTTGGCG GCTAGCGGAC TACTTGCCCG GCAGATCGGT GGCCCGAGCG TATTGCCCTA TCAGCCGTCG GGTATCTGGG AAGCGTTGGC TACCCGGAAC GCTGTGAAGT ACGAACAGGA TCATGGCGAT AGTCTATACC GCCGGTCGAT GTACACCATC TGGAAACGGT CATCACCACC GCCCATGATG TTGAATTTCG ATGCGGCCGA GCGACATACC TGCATTGTGA AACGCCAGAA AACCAGTACA CCTTTACAAG CACTCGTAAC GCTGAACGAT CCGCAGTTTG TGGAAGCTGC ACGAGTGCTT GCACAAAAAG TAGTGCCGAC GTCTGTAGTG CCGACCGTCC CGGTCGGGCG AGCTGGTTCT ATACGCCCGA CCGGGACGGT CGGCACTACA GACGTTGGCA TCAACGCTAT TTTTAAAGCG GTTATCAGCC GCCCGGCCCG ACCAGAGGAG ATGGCGCTGG TGAACCAGTT GTACGCCGAA GAACTGGCTG ATTTTAAACA AAATCCGAAG CGGGCCGCAG AGTTGTTATC AGTGGGGGAG TATCCTGTTG ATAAAAAGCG AAATCCAGCC GAATTAGCTG CCTGGACCGT GGTTACGAGT ACGATTATGA ATTTCGACGA AGCGATTGTA AAACGATAA
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Protein sequence | MLVWSDIRFK YVFLSATAGL FGTSIWLTSC QSSVEKPAEI VAVEATLPEK VDYNLHVKPI LSDRCFACHG PDKAKQQAGL RLDTPDGAYE ALAKSGHKAI VPGNLAKSEL VSRILSTDPE EMMPTPKSNL TLTTEEKAML IRWVEQGAEY KEHWSLIAPT LPEIPKVKDE KWVVNDIDGF ILAKQEAKKV SHAPEADKTT LLRRVSLDLT GLPPTPAEVD AFLADKSPNA YEKVVNRLLN SPHYGERQAV EWLDVARYAD THGYQDDGLR TMWPYRDWVI RAYNHNLSFD RFITWQLAGD LLPNLNGSKD KREKLIATAF NRNHQQSQEG GIVDEEYRTE YVADRTNTFG KAMLGLTVEC ARCHDHKYDP ISQKDYYSLY AFFDSNNDRG QIPYNGEAAP TITLTKPETE AKLRFIREKL TPIQQQLNLN RPDYQQRFGQ WLAKTRVVSS IDSGLLAHYT FDEADRTDIG AYVKAKNEER KREEEKKKRE EDAKRKKEGI AKAGKPEAKQ PEKKEPPKRK TKEELWKDPR NAFANSVNDT IPARLGGDPD KVPYVVPGRF GKARYLAGDS FIELPGNFAV FEQNEPFTVS SWFNLAKPNM ALTLMGRTTG PMDGQRGYQL DLLSDGRLKL AFSHVWPANA IDVETIEKVP VHQWFQVAFA YDGTGRANGI SLYLNGRPLR TKIIADNLIH SMVYGKNRSH WAQHPFYVGR MHDNFYKDFA VDELRIYNRC LTPLEMPKLA GQPDALMAAL QTPAANRTPA QRTGLYTYYV RTQDPVYKTT YANAMKLRGE QITLYTDSDQ LMVMQERSVP RETHLLKRGA YDAPGEVVKP AVLHSLNPLE DDMPTNRLGL AKWLLAPENP LFSRVMVNRM WQQYFGQGLA KNSDDFGNQG ALPSHPELLD YLAMKFRDMG EWGGQWNTKA MHKMIVMSAT YRQSSSVPEN VREADPDNTY LTRGPSYRMS AEQVRDNALA ASGLLARQIG GPSVLPYQPS GIWEALATRN AVKYEQDHGD SLYRRSMYTI WKRSSPPPMM LNFDAAERHT CIVKRQKTST PLQALVTLND PQFVEAARVL AQKVVPTSVV PTVPVGRAGS IRPTGTVGTT DVGINAIFKA VISRPARPEE MALVNQLYAE ELADFKQNPK RAAELLSVGE YPVDKKRNPA ELAAWTVVTS TIMNFDEAIV KR
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